barSeed - Barley Seed Development Database

Probe ABC00028

Source Contig ABC00028

barSeed

Links

Affymetrix Source Sequence (692 bp)

>ABC00028 692
CGGCAATCAGCAGTCAAGCAATCTCCACACACATCTCTCCTACTCCCGAATCCGTTCTCC
ACCTAGCCATGGACGCCTCAGCCACCGTAGCCGCCGGGAAGGGGAAGAAGGGCGCGGCCG
GGCGCAAGGCCGGCGGCCCCAGGAAGAAGTCCGTGTCGCGGTCCGTCAAGGCCGGGCTCC
AGTTCCCCGTCAGCCGCATCGGGCGCTTCCTCAAGAAGGGCCGCTACGCGCAGCGCGTCG
GTTCCGGCGCCCCCGTCTACCTCGCGGCGGTCCTCGAGTACCTCGCCGCCGAGCTGCTGG
AGCTGGCGGGCAACGCCGCCAAGGACAACAAGAAGAGCCGCATCACCCCCCGCCACCTGC
TGCTCGCCATCAGGAACGACGAGGAGCTCGGCAAGCTGCTCACCGGCATCACCATCGCGC
ACGGCGGCGTCATCCCCAACATCAACCCGGTGCTGCTCCCCAAGAAAACCGCCGAGAAGT
CGCCCAAGGAGCCCAAGTCGCCCAAGAAGACCGCCAAGTCCCCCAAGAAGGCGTAGGCGG
CCATTGCGTAGTTAGGTCGGAGTAGCTGGGATGGATGTTACATGCATGGGTGTGCTTCAG
CTCGAAGCACACTGTTTCCAGTTGTGTCGTTGTATCTTCAGACCTGTGAATTCTATGGAA
CAATGAGTTGCTTTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369538	691	0.0	10 - 609	99	598 / 600	CUST_35181_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00443 ABC00571 ABC00648 ABC00656 ABC00709 ABC00869 ABC17259
AK374797	691	2e-173	108 - 542	92	400 / 435	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_68568.2	976	6e-169	89 - 563	89	424 / 475	CUST_39524_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_68568.1	689	6e-169	90 - 564	89	424 / 475	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
AK248367.1	737	2e-163	74 - 532	89	415 / 465	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK373523	676	2e-163	112 - 546	91	394 / 435	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK365600	715	4e-151	82 - 554	87	413 / 474	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_65183.1	1053	2e-138	395 - 859	86	407 / 474	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
AK250581.1	781	1e-131	124 - 533	88	362 / 412	CUST_21691_PI390587928 CUST_39507_PI390587928 CUST_39452_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
AK371572	872	4e-131	289 - 727	86	380 / 442	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK251852.1	741	7e-129	127 - 525	88	353 / 401	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK376310	633	9e-123	74 - 446	88	331 / 375	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK251986.1	744	3e-122	74 - 472	87	349 / 401	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK373742	770	1e-121	103 - 507	86	352 / 407	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK250752.1	723	1e-121	107 - 511	86	352 / 407	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_24886.1	550	1e-121	142 - 546	86	352 / 407	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK252601.1	938	5e-120	127 - 474	89	310 / 348	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK252060.1	846	5e-120	124 - 462	90	304 / 339	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK374191	752	5e-120	109 - 509	87	348 / 402	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_25652.1	512	7e-119	117 - 512	86	344 / 399	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_65183.2	490	9e-118	96 - 456	88	325 / 370	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
MLOC_43244.1	861	1e-115	309 - 710	86	344 / 402	CUST_7984_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_40625.1	370	2e-108	1 - 261	94	245 / 261	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_38467.1	1710	2e-100	1425 - 1710	90	257 / 286	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	2e-100	859 - 1144	90	257 / 286	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	2e-100	1403 - 1688	90	257 / 286	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_25856.1	978	3e-98	694 - 978	89	255 / 285	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
MLOC_33635.1	424	9e-98	105 - 424	87	283 / 326	None	ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869 ABC17259
MLOC_25856.2	861	3e-97	579 - 861	89	253 / 283	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
MLOC_32058.1	266	1e-91	1 - 261	90	235 / 261	None	ABC00028 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00412 ABC00414 ABC00571 ABC00709 ABC00869
MLOC_18705.1	455	2e-90	1 - 247	91	225 / 247	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00656 ABC00709 ABC00869 ABC17259
MLOC_48186.1	317	7e-84	65 - 317	89	225 / 253	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_68554.1	197	4e-76	1 - 197	93	183 / 197	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_81367.2	510	6e-75	235 - 506	86	236 / 274	CUST_39452_PI390587928 CUST_21691_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_33483.3	512	1e-71	244 - 512	85	232 / 273	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
MLOC_81367.3	292	3e-68	19 - 292	85	234 / 276	None	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK249306.1	821	2e-65	423 - 645	87	195 / 224	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_47807.1	235	2e-65	100 - 235	100	136 / 136	None	ABC00028 ABC00118 ABC00414
MLOC_28533.1	520	2e-65	123 - 345	87	195 / 224	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC17259
MLOC_42906.1	312	6e-65	109 - 312	89	181 / 204	None	ABC00028 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414
MLOC_31809.1	177	6e-65	1 - 177	92	163 / 177	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_81367.1	756	1e-62	392 - 638	85	212 / 249	CUST_21691_PI390587928 CUST_39507_PI390587928 CUST_39452_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208
MLOC_33483.1	1189	2e-59	790 - 1024	85	202 / 239	CUST_1269_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
MLOC_33483.2	607	2e-59	258 - 442	89	165 / 185	CUST_1269_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
MLOC_44860.1	1171	6e-55	1 - 165	90	154 / 171	CUST_39520_PI390587928	ABC00028 ABC00118 ABC00414