barSeed - Barley Seed Development Database

Probe ABC30208

Source Contig ABC30208

barSeed

Links

Affymetrix Source Sequence (365 bp)

>ABC30208 365
CCCAACATCAATCCGGTGCTGCTCCCCAAGAAGTCCCCCGAGAAGCCCGAGAAGCCCGGC
CCCCCCGCCAAGTCGCCCAAGAAGCCCGCCAAGTCCCCCAAGAAGCCCGCCAAGCCCTAG
ATCCGCCCGCCAGTAGCTGTCTCAGCGAACTGACGATGCTCCGTCGGCGGCTTTCGCGTG
CGCAGCGTCCCTCTTAATTTAGCTATGTCATTGAGTGTTCGTGTTTGATTAGGTGCCCCC
CCTGTCTCGGTGGCTGATTTCAATATGTATCATCCTGATGTAATCGCGAACCAAGGGGAA
CCCGCTTGCTTCCTGCTTGACTGATGGATTATCAACTAAGCGTTTCTGAAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250581.1	781	6e-157	427 - 780	95	336 / 354	CUST_39507_PI390587928 CUST_21691_PI390587928 CUST_39452_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
MLOC_81367.1	756	6e-152	148 - 498	94	331 / 351	CUST_39507_PI390587928 CUST_21691_PI390587928 CUST_39452_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208
MLOC_81367.2	510	2e-146	1 - 341	94	321 / 341	CUST_39452_PI390587928 CUST_21691_PI390587928	ABC00028 ABC00054 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597