barSeed - Barley Seed Development Database

Probe ABC00076

Source Contig ABC00076

barSeed

Links

Affymetrix Source Sequence (681 bp)

>ABC00076 681
CCGCAATCCACCAACCACCATCACCAAATCTCTCTGCCCCTATCCAGCTTTCTCTCAAAA
GCTCCGTCTGTCAGCAATGGAGGTTTCAGGCGCTGCAGCGAAGGGAAAGAAGGGCGCTGC
AGGGCGCAAGGCCGGCGGCCCGAGGAAGAAGTCAGTGACGCGGTCCGTGAAGGCCGGGCT
CCAGTTCCCCGTCGGCCGCATCGGGCGCTACCTCAAGAAGGGCCGGTACGCGCAGCGCGT
CGGCACCGGTGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTGGCTGCCGAGCTGCT
GGAGCTCGCCGGGAACGCCGCCAAGGACAACAAGAAGAGCCGCATCATCCCGCGCCACCT
GCTGCTCGCCGTCAGGAACGACGAGGAGCTCGGAAAGCTGCTGGCCGGCGTCACCATCGC
GCACGGCGGCGTGATCCCCAAGATCAACCCGGTGCTGCTCCCCAAGAGGACCGCGGAGAA
GGAGGGCAAGGGGCCCAAGTCCCCCAAGAAGGCCACCAAGTCCCCGAAGAAGGCCACCAA
GGCTTAGGAACACGCATAGGTTGATGTAGGTTGCTTAATGTCTGTAACATTGGTCGTTGT
TTGGCTAATGGTGTCGATGTAATCTTTGCTGTTAAGAGTAATGTCAGAAATCACTCTGAT
CCGGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373523	676	0.0	13 - 676	100	664 / 664	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK374797	691	0.0	80 - 555	96	456 / 476	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_25856.1	978	0.0	562 - 977	98	408 / 416	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
MLOC_25856.2	861	0.0	447 - 861	98	407 / 415	CUST_39527_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869
MLOC_42937.1	386	0.0	19 - 384	99	363 / 366	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK248367.1	737	0.0	96 - 539	93	413 / 444	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK365600	715	2e-173	117 - 675	87	494 / 571	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_68568.2	976	8e-168	122 - 558	91	398 / 437	CUST_39524_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
MLOC_68568.1	689	8e-168	123 - 559	91	398 / 437	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00494 ABC00648 ABC00709 ABC00869
AK369538	691	5e-165	107 - 541	91	395 / 435	CUST_35181_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00443 ABC00571 ABC00648 ABC00656 ABC00709 ABC00869 ABC17259
AK371572	872	3e-152	294 - 728	89	390 / 438	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_25652.1	512	4e-141	116 - 512	90	358 / 400	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259
AK251852.1	741	7e-134	118 - 451	93	309 / 334	CUST_39512_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK250581.1	781	7e-129	124 - 546	87	367 / 423	CUST_39507_PI390587928 CUST_21691_PI390587928 CUST_39452_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC30208 ABC44597
AK376310	633	7e-129	65 - 398	92	306 / 334	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_65183.1	1053	9e-128	399 - 805	87	362 / 416	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
AK251986.1	744	3e-127	65 - 398	91	305 / 334	CUST_39515_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK252060.1	846	3e-127	115 - 463	90	316 / 350	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK374121	736	3e-127	111 - 509	88	351 / 400	CUST_33969_PI390587928 CUST_39472_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC42929
AK369442	685	1e-125	65 - 473	87	357 / 410	CUST_39489_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584 ABC44597
AK374191	752	1e-125	100 - 510	87	357 / 411	CUST_39476_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
MLOC_40625.1	370	1e-125	1 - 289	95	274 / 289	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
AK250752.1	723	5e-125	116 - 511	87	347 / 397	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_24886.1	550	5e-125	151 - 546	87	347 / 397	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_18705.1	455	5e-125	3 - 260	98	253 / 258	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00118 ABC00167 ABC00188 ABC00412 ABC00414 ABC00656 ABC00709 ABC00869 ABC17259
AK248534.1	712	7e-124	113 - 511	87	348 / 399	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK366376	1562	2e-123	104 - 499	87	346 / 397	CUST_39473_PI390587928 CUST_35203_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
AK251633.1	761	2e-123	107 - 502	87	346 / 397	CUST_35203_PI390587928 CUST_39473_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC34584
MLOC_43244.1	861	9e-123	291 - 688	87	346 / 398	CUST_7984_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_55495.1	662	1e-121	201 - 575	88	329 / 375	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK252540.1	738	5e-120	104 - 499	87	344 / 397	CUST_39525_PI390587928	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00239 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC34584
AK252601.1	938	7e-119	127 - 475	89	310 / 349	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869
AK373742	770	7e-119	114 - 507	87	342 / 395	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584 ABC44597
AK353773	705	4e-116	111 - 519	86	350 / 409	None	ABC00016 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869
MLOC_65183.2	490	5e-115	100 - 455	88	320 / 365	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00443 ABC00494 ABC00571 ABC00656 ABC00709 ABC17259
MLOC_38467.1	1710	9e-108	1424 - 1710	91	263 / 288	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.3	1144	9e-108	858 - 1144	91	263 / 288	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_38467.2	1688	9e-108	1402 - 1688	91	263 / 288	CUST_27897_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
MLOC_33635.1	424	9e-103	127 - 422	90	265 / 296	None	ABC00028 ABC00054 ABC00076 ABC00096 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC00869 ABC17259
MLOC_32058.1	266	2e-95	2 - 266	91	242 / 267	None	ABC00028 ABC00076 ABC00118 ABC00145 ABC00167 ABC00188 ABC00412 ABC00414 ABC00571 ABC00709 ABC00869
MLOC_23198.1	524	7e-94	186 - 524	86	291 / 340	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259 ABC34584
MLOC_50368.1	374	9e-93	1 - 248	92	227 / 248	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_48186.1	317	7e-89	65 - 317	90	229 / 254	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
AK249306.1	821	5e-85	423 - 657	91	217 / 239	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_28533.1	520	2e-60	340 - 520	90	163 / 181	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414 ABC00709 ABC17259
MLOC_42906.1	312	1e-81	95 - 312	92	203 / 221	None	ABC00028 ABC00076 ABC00118 ABC00188 ABC00412 ABC00414
MLOC_68554.1	197	4e-81	1 - 197	94	186 / 197	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_33596.1	622	7e-69	358 - 622	85	224 / 265	None	ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00167 ABC00188 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597 ABC47465
MLOC_31809.1	177	3e-68	1 - 177	93	165 / 177	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259
MLOC_35155.1	682	7e-64	148 - 466	81	260 / 322	CUST_39469_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00671 ABC00709 ABC00869 ABC44597
AK374620	653	3e-62	151 - 469	81	261 / 324	CUST_39519_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00671 ABC00709 ABC00869
MLOC_42937.2	160	2e-59	18 - 145	99	127 / 128	None	ABC00076
MLOC_15497.1	785	7e-59	626 - 785	93	148 / 160	CUST_39486_PI390587928	ABC00076 ABC00188 ABC00412 ABC31767 ABC39313
MLOC_40625.2	254	4e-56	54 - 196	94	135 / 143	None	ABC00076 ABC00188
MLOC_23606.1	451	6e-55	100 - 252	92	141 / 153	None	ABC00054 ABC00076 ABC00085 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00671 ABC00709 ABC00869
MLOC_28615.1	503	1e-52	1 - 186	87	162 / 186	None	ABC00054 ABC00076 ABC00412