barSeed - Barley Seed Development Database

Probe ABC00321

Source Contig ABC00321

barSeed

Links

Affymetrix Source Sequence (797 bp)

>ABC00321 797
AGGGCTTTCGCCTCCACAGCCTCTTGTCCCCTCGCCCGTTCCGTCTCCCGTAGCAGCGCC
TCCCTTCGTTCCCCTCTTCCTCGGTTGCTGAAATGGCCGGCCGTGGGAAGGCAATCGGCG
CTGGCGCTGTCAAGAAGGCGACGTCGAGGAGTTCCAAGGCCGGGCTGCAGTTCCCAGTTG
GCAGGATCGCCAGGTTCCTCAAGGCCGGCAAGTACGCAGAGCGCGTCGGAGCCGGCGCCC
CTGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCTGAGGTTCTGGAGCTGGCCGGCA
ATGCCGCCAGGGACAACAAGAAGACCCGTATCGTGCCCCGCCACATCCAGCTCGCTGTGC
GCAATGACGAGGAGTTGACCAAGTTGCTTGGCGGTGCCACCATTGCCAGTGGCGGTGTGA
TGCCCAACATCCACCAGCACCTCCTCCCAAAGAAGGCCTCTTCTTCCAAGGCCTCCACCG
TCGATGACGACGACAACTGAGGCCCGCCCTTTTCATCACTGCCACCCCAGTCATGGATTA
CATTTGCATCACAAAGAGGGAGGAGTTTCTTGTTTCCTAGGATTTAGTGTCTTGGTTTTC
AGAAGAGTCCGGATGGTTTGGTATTAGGAATTTCTAGTTGGTGGTCGGATTAGTTGCTTC
AATCCTATGGCTGTGAATATGCCAAAGAAATTATCGAGTGTTTAAACTCAGATGTAATCC
TGCTTGATCTTATCCGGTTTCCATGGTTGAAGAAATTGAAAGGATCTGAACTTTAAGCAA
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64939.2	900	0.0	1 - 719	99	717 / 719	None	ABC00016 ABC00119 ABC00188 ABC00321 ABC00350 ABC00550 ABC00709 ABC03002 ABC31695 ABC44597
MLOC_64939.1	1309	1e-142	848 - 1128	99	279 / 281	CUST_39505_PI390587928	ABC00321 ABC31695 ABC48284
AK374620	653	1e-81	169 - 474	85	262 / 309	CUST_39519_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00671 ABC00709 ABC00869
MLOC_35155.1	682	1e-81	166 - 471	85	260 / 307	CUST_39469_PI390587928	ABC00016 ABC00054 ABC00076 ABC00085 ABC00096 ABC00119 ABC00137 ABC00145 ABC00154 ABC00167 ABC00188 ABC00321 ABC00350 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00671 ABC00709 ABC00869 ABC44597
MLOC_57143.1	818	7e-75	334 - 636	84	256 / 306	None	ABC00016 ABC00096 ABC00119 ABC00286 ABC00321 ABC00350 ABC00412 ABC00550 ABC00709 ABC44597
AK252060.1	846	4e-52	150 - 453	79	241 / 305	None	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597
AK374797	691	5e-51	177 - 457	80	225 / 282	CUST_39511_PI390587928	ABC00028 ABC00054 ABC00076 ABC00085 ABC00118 ABC00119 ABC00137 ABC00145 ABC00154 ABC00158 ABC00167 ABC00188 ABC00286 ABC00321 ABC00350 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00494 ABC00550 ABC00571 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC44597