barSeed - Barley Seed Development Database

Probe ABC39313

Source Contig ABC39313

barSeed

Links

Affymetrix Source Sequence (276 bp)

>ABC39313 276
TCCCCAAGAGGCCCGCGGAAAAGGAGGCCAAGGCGCCAAAGTCCCCCAAGAAGGCGCCCA
AGTCCCCCAAGAAGCCCGCCAAGTCGCCCAAAAAGCCCCCCCCCCCAAAAAAGGCCTGAT
GGAGATGCGTTCTGTGTCGTTTAGCCTGTGTGCTGCGTAGTGTTCTTCTTCTGAATCTGA
ATAGGGGTGTGAAGTCGTTCGTTAGTTGTTATGTCCCTTGTGTTGTGATGGAAGGAATTC
AGAAATCTCGTTTAGTTCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248367.1	737	3e-119	457 - 734	95	263 / 278	CUST_39486_PI390587928	ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOC_15497.1	785	4e-112	444 - 708	94	250 / 265	CUST_39486_PI390587928	ABC00076 ABC00188 ABC00412 ABC31767 ABC39313
AK249306.1	821	8e-65	622 - 818	90	179 / 200	None	ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
AK371572	872	3e-54	691 - 872	88	163 / 185	None	ABC00028 ABC00054 ABC00076 ABC00118 ABC00145 ABC00154 ABC00167 ABC00188 ABC00412 ABC00414 ABC00427 ABC00440 ABC00443 ABC00550 ABC00571 ABC00656 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313