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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5200_PI390587928Hv_44K_v2AGTCCTCTGACACGATCGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCC367GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK248348.114073e-21310 - 3699758 / 60plus ABC01035 ABC01036 ABC01038 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01058 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC39599 ABC49693 ABC50770
MLOCAK37548816133e-21382 - 4419758 / 60plus ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC24558 ABC39287 ABC39599 ABC43994 ABC49693 ABC50770
JLOC1JLOC1_45407.14914e-23290 - 3499859 / 60plus
JLOC1JLOC1_53296.12492e-2159 - 1189758 / 60plus
JLOC1JLOC1_5221.13942e-21322 - 3819758 / 60plus
JLOC1JLOC1_5222.112242e-2114 - 739758 / 60minus
Harvest21ABC354316315e-2313 - 719858 / 59plus
Harvest21ABC342515872e-211 - 569855 / 56plus
Harvest21ABC010597001e-23221 - 2809859 / 60plus
Harvest21ABC010577751e-23572 - 6319859 / 60plus
Harvest21ABC011056666e-22366 - 4259758 / 60plus
Harvest21ABC011026561e-23140 - 1999859 / 60plus
Harvest21ABC010356401e-23543 - 6029859 / 60minusABC01035
Harvest21ABC010329176e-22137 - 1969758 / 60plus
Harvest21ABC010607556e-2249 - 1089758 / 60plus
Harvest21ABC010949736e-22800 - 8599758 / 60minusABC01094
Harvest21ABC010527856e-22160 - 2199758 / 60plus
Harvest21ABC010295766e-22228 - 2879758 / 60plus
Harvest21ABC0107812458e-21177 - 2349756 / 58plusABC01078
Harvest35U35_137447591e-23596 - 6559859 / 60plus
Harvest35U35_138779704e-24116 - 17310058 / 58plus
Harvest35U35_1388710401e-23221 - 2809859 / 60plus
Harvest35U35_138349271e-23151 - 2109859 / 60plus
Harvest35U35_1373712806e-22186 - 2459758 / 60plus
Harvest35U35_1372110656e-22104 - 1639758 / 60plus
Harvest35U35_1371512891e-23141 - 2009859 / 60plus
Harvest35U35_1365312301e-23848 - 9079859 / 60plus
Harvest35U35_137129886e-22115 - 1749758 / 60plus
Harvest35U35_1374116958e-21625 - 6829756 / 58plus



Contig Sequence (759 bp)

>U35_13744 759 Hv_44K_v2
CAGCGCAACGGAACCAACAAATCCCCAACCAATCTCGTCTCCAATCGACCCGAGGCTCGT
CGAATCCTCCTCCCCCGCCGCTTCAAGATGCAGATCTTCGTGAAGACCCTCACCGGCAAG
ACCATCACCCTTGAGGTTGAGAGCTCTGACACTATCGACAACGTCAAGGCCAAGATCCAG
GATAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAG
GATGGTCGCACCCTTGCTGACTACAATATCCAGAAGGAGTCCACCCTTCACCTTGTGCTC
CGCCTCCGGGGTGGTATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTG
GAGGTTGAGTCCTCTGACACGATCGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGC
ATCCCCCCGGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACC
CTTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGT
GGTATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCC
TCTGACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC
CAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTAC
AACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGC



Homology of Contig U35_13744 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os06g46770.63061e-153protein|ubiquitin family protein, putative, expressed
Brachypodium v1_2Bradi3g04730.22309e-155
Arabidopsis v10AT4G05050.12297e-155| Symbols: UBQ11 | ubiquitin 11 | chr4:2588271-2588960 REVERSE LENGTH=229