- Probe CUST_14531_PI390587928
- Source Contig U35_13813
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_14531_PI390587928 | Hv_44K_v2 | GTTTTAAACAGTTGCTGGTACAGCAGTATTATTGAGTAATGAATAAGTGAACTTCGGGTA | 379 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK357004 | 1103 | 2e-24 | 845 - 904 | 100 | 60 / 60 | plus | ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770 |
MLOC | AK371303 | 1634 | 6e-24 | 1576 - 1634 | 100 | 59 / 59 | plus | ABC01030 ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01053 ABC01056 ABC01072 ABC01078 ABC01079 ABC01094 ABC01106 ABC01108 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC49011 ABC49693 ABC50770 |
JLOC1 | JLOC1_11787.1 | 1002 | 8e-25 | 687 - 746 | 100 | 60 / 60 | minus | |
Harvest21 | ABC49011 | 390 | 3e-25 | 316 - 375 | 100 | 60 / 60 | plus | ABC49011 |
Harvest21 | ABC31146 | 548 | 3e-25 | 291 - 350 | 100 | 60 / 60 | plus | |
Harvest21 | ABC01115 | 455 | 3e-25 | 380 - 439 | 100 | 60 / 60 | plus | |
Harvest21 | ABC01084 | 724 | 3e-25 | 645 - 704 | 100 | 60 / 60 | plus | |
Harvest21 | ABC01027 | 985 | 3e-25 | 17 - 76 | 100 | 60 / 60 | minus | |
Harvest35 | U35_31005 | 548 | 3e-25 | 291 - 350 | 100 | 60 / 60 | plus | |
Harvest35 | U35_13813 | 455 | 3e-25 | 380 - 439 | 100 | 60 / 60 | plus | |
Harvest35 | U35_13652 | 1622 | 3e-25 | 1530 - 1589 | 100 | 60 / 60 | plus |
Contig Sequence (455 bp)
>U35_13813 455 Hv_44K_v2 GCACGAGGGTCGAATCCTCCTCCCCGCCGCCTCAAGATGCAGATCTTCGTGAAGACCCTC ACTGGCAAGACCATCACCCTTGAGGTTGAGAGCTCTGACACCATCGACAACGTCAAGGCC AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTTGCCGGCAAA CAGCTGGAGGATGGCCGCACCCTTGCGGACTACAACATTCAGAAGGAGTCCACCCTTCAC CTGGTGCTCCGCCTCCGTGGTGGTCAGTAAACATCCTGGTTCGTCCTTCGGGTGGTGCCC TGTTTCGATAATTTGAACTGTTATCTTGTTCGCGTCAGTCCTATCGTGTTTGTTTGATGA ACTATCGAGTCACCTATGGGTTTTAAACAGTTGCTGGTACAGCAGTATTATTGAGTAATG AATAAGTGAACTTCGGGTAAAAAAAAAAAAAAAAA
Homology of Contig U35_13813 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |