- Probe CUST_14536_PI390587928
- Source Contig U35_13808
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_14536_PI390587928 | Hv_44K_v2 | GTGGTTTAAACTGTTGCTGGTACAGCAGTATCATCAACTAATGAATAAGTGAACTTCATA | 361 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK252178.1 | 1017 | 2e-24 | 957 - 1016 | 100 | 60 / 60 | plus | ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770 |
| MLOC | MLOC_69214.1 | 256 | 2e-24 | 14 - 73 | 100 | 60 / 60 | plus | ABC28899 |
| MLOC | AK249379.1 | 803 | 9e-22 | 728 - 782 | 100 | 55 / 55 | plus | ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01068 ABC01072 ABC01078 ABC01079 ABC01086 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC40413 ABC40573 ABC49011 ABC49693 ABC50770 |
| JLOC1 | JLOC1_45853.1 | 429 | 8e-25 | 225 - 284 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC35249 | 541 | 3e-25 | 448 - 507 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC28899 | 186 | 3e-25 | 46 - 105 | 100 | 60 / 60 | plus | ABC28899 |
| Harvest21 | ABC01098 | 472 | 3e-25 | 21 - 80 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC01042 | 1006 | 3e-25 | 929 - 988 | 100 | 60 / 60 | plus | ABC01042 |
| Harvest21 | ABC40573 | 263 | 6e-22 | 19 - 78 | 97 | 58 / 60 | minus | ABC40573 |
| Harvest35 | U35_13808 | 441 | 3e-25 | 362 - 421 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13733 | 1110 | 3e-25 | 947 - 1006 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13714 | 539 | 3e-25 | 448 - 507 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37652 | 715 | 8e-21 | 661 - 715 | 98 | 55 / 56 | plus |
Contig Sequence (441 bp)
>U35_13808 441 Hv_44K_v2 GGCAGATCTTTGTGAAGACATTGACGGGCAAGACCATCACCCTTGAGGTGGAATCCTCTG ACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGC AGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGGACCCTTGCGGACTACAACA TCCAGAAGGAGTCTACCCTTCACCTGGTGCTCCGCCTCCGTGGTGGTCAGTAATTGCCCT AGCGTTGGAAGTCCTGGGTCGTCCGGTGGGCGGTGCCCTGTCTGTTCAATTGAACTGTTT TCTCGTTTGCGTCTGTCCTACTGTGGTTGGTTTAATGAACTATAGAGTCACCGTGTTATG TGTGGTTTAAACTGTTGCTGGTACAGCAGTATCATCAACTAATGAATAAGTGAACTTCAT ATNNAAAAAAAAAAAAAAAAA
Homology of Contig U35_13808 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |