Information & Computational Sciences

Tag: genotyping

New in Flapjack 1.14.09.24

By on 24/09/2014 in News
New in Flapjack 1.14.09.24

Flapjack has just been updated to version 1.14.09.24. NEW: Implemented a new graph based view of each chromosome selectable from the Chromosomes Panel. NEW: Optimised the hiding lines and markers code so it is now significantly faster. NEW: The list of chromosomes is now always sorted and presented alphabetically. NEW: Added a progress tracker dialog […]

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New in Flapjack 1.14.07.21

By on 21/07/2014 in News
New in Flapjack 1.14.07.21

Flapjack has just been updated to version 1.14.07.21. NEW: Added a new colour scheme to visualize MAGIC population data in Flapjack. NEW: Added a new (unfinished) “chromosomes” view of the data set. CHG: Flapjack will now only send any traits active on the current view’s heatmap when passing data to CurlyWhirly. CHG: The recently opened […]

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New in Flapjack 1.14.04.29

By on 29/04/2014 in News
New in Flapjack 1.14.04.29

Flapjack has just been updated to version 1.14.04.29. NEW: Flapjack now recognises bin-headers (#bin) in an input file and displays this information when mousing over an entry. NEW: Lines and markers can now be selected by loading in text files with the names of lines/markers to be selected. NEW: The menus showing colour scheme options […]

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New in Flapjack 1.14.03.17

By on 17/03/2014 in News
New in Flapjack 1.14.03.17

Flapjack has just been updated to version 1.14.03.17. NEW: The project format is now an sqlite database file, wrapped around the original Flapjack xml. Existing projects in xml (or compressed xml) should still load into Flapjack. NEW: Flapjack can now save large analysis results (eg similarity matrices, dendrograms, etc) directly to its database file without […]

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New in Flapjack 1.13.03.19

By on 19/03/2013 in News
New in Flapjack 1.13.03.19

Flapjack has just been updated to version 1.13.03.19. BUG: Searching for lines by name was no longer working.

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New in Flapjack 1.13.03.18

By on 18/03/2013 in News
New in Flapjack 1.13.03.18

Flapjack has just been updated to version 1.13.03.18. NEW: Added support for duplicating a line. NEW: Optimised some of the similarity matrix calculation code to make it about      50% faster. NEW: Enhanced SplitProject so it can selectively process datasets, with optional      renaming of them. BUG: Export options for all-chromosomes were not behaving properly […]

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New in Flapjack 1.12.05.25

By on 25/05/2012 in News
New in Flapjack 1.12.05.25

Flapjack has just been updated to version 1.12.05.25. NEW: Sorting by trait can now be done on any number of sort levels. NEW: Redesigned the Sort by Trait dialog to present a tabular control for      defining the sort levels. NEW: Added file header support so Flapjack can properly identify its input      files. NEW: […]

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New in Flapjack 1.11.12.13

By on 13/12/2011 in News with 0 Comments
New in Flapjack 1.11.12.13

Flapjack has just been updated to version 1.11.12.13. NEW: Added the ability to export an all-by-all similarity matrix for the lines      within the current view. NEW: Added support for a sort splitter, that denotes that all lines above it      are exempt from sorting and always keep their order. Lines below are      sorted […]

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New in Flapjack 1.11.07.06

By on 06/07/2011 in News with 0 Comments
New in Flapjack 1.11.07.06

Flapjack has just been updated to version 1.11.07.06. NEW: Added a new option to the edit menu – Filter missing markers – that allows      the removal of markers with missing data over a given threshold limit. NEW: You can now select up to three graphs to be displayed alongside the      genotypes at one […]

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New in Flapjack 1.11.04.21

By on 21/04/2011 in News with 0 Comments
New in Flapjack 1.11.04.21

Flapjack has just been updated to version 1.11.04.21. NEW: The CreateProject executable will now append datasets into existing      projects if the file already exists. NEW: Phenotypic trait data can now be exported from Flapjack to a file on disk. NEW: QTL data can now be exported from Flapjack to a file on disk. BUG: […]

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