We have a new page describing Germinate and what it can do! Please visit https://ics.hutton.ac.uk/get-germinate for more information. What is Germinate Germinate is a generic plant genetic resources database and offers facilities to store both standard collection information and passport data along with more advanced data types such as phenotypic, genotypic and field trial data. […]

Flapjack is a multi-platform application providing interactive visualizations of high-throughput genotype data, allowing for rapid navigation and comparisons between lines, markers and chromosomes. Visit the download page to get the latest version of Flapjack (1.19.03.18; 18th March 2019). You can get a full list of recent new additions, changes or bug fixes by reading through […]

Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Visit the download page to get the latest version of Tablet (1.19.05.28; 28th May 2019). Please cite: Milne I, Stephen G, Bayer M, Cock PJA, Pritchard L, Cardle L, Shaw PD and Marshall D. 2013. Using Tablet for visual exploration of second-generation […]

CurlyWhirly is designed for the visualization of 3D data provided as Cartesian coordinate data and is particularly well suited for visualizing the outputs of analyses such as Multidimensional Scaling and Principal Coordinates Analysis. It comfortably handles large-scale genetic diversity data with plots containing tens of thousands of data points on relatively modest hardware. To explore […]

Helium Pedigree Visualization Framework We are pleased to announce that Helium is now available for download from our GitHub page. The ability to predict and visualize the inheritance of genes that facilitate resistance to pathogens or any other commercially important characteristic is crucially important to experimental plant genetics and commercial plant breeding programmes. Derivation of […]

Germinate Mobile is an Android application that acts as a mobile interface for the Germinate system. The goal of this app is to enable researchers to get detailed information about plants on their smartphone or tablet while they are out and about in the fields. Images as well as passport and pedigree information are accessible […]