Information & Computational Sciences

Tag: genotyping

New in Flapjack 1.21.02.04

By on 04/02/2021 in News
New in Flapjack 1.21.02.04

Flapjack has just been updated to version 1.21.02.04. BUG: Fixes to deal with server-side changes between HTTP/HTTPS that were preventing downloads of the sample data.

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New in Flapjack 1.21.02.01

By on 01/02/2021 in News
New in Flapjack 1.21.02.01

Flapjack has just been updated to version 1.21.02.01. CHG: Minor change to the way indexed forward breeding calculates its breeding values (non missing).

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New in Flapjack 1.21.01.22

By on 22/01/2021 in News
New in Flapjack 1.21.01.22

Flapjack has just been updated to version 1.21.01.22. NEW: Flapjack now pre-scans an intertek file to determine if it’s tab or comma separated. NEW: Added Shift+MouseWheel horizontal scrolling to the main canvas area. CHG: Forward breeding now uses the non-weighted version of hets (ie scores 0.5 rather than weighted 0.6). BUG: Fixed issues related to […]

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New in Flapjack 1.20.10.10

By on 07/10/2020 in News
New in Flapjack 1.20.10.10

Flapjack has just been updated to version 1.20.10.07. NEW: Huge changes to Flapjack’s BrAPI codebase with the result that Flapjack is now BrAPI version 2.0 compliant. NEW: BrAPI support includes downloading of data in both JSON and Flapjack (bulk file) formats. NEW: Flapjack now uses the actual variant set name (from BrAPI) to name an […]

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New in Flapjack 1.19.09.04

By on 04/09/2019 in News
New in Flapjack 1.19.09.04

Flapjack has just been updated to version 1.19.09.04. NEW: Improved compatibility with macOS and JRE11, which should reinstate missing About/Preferences options too.

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New in Flapjack 1.19.07.04

By on 09/07/2019 in News
New in Flapjack 1.19.07.04

Flapjack has just been updated to version 1.19.07.04. NEW: Enabled an early version of a Forward Breeding Analysis.

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New in Flapjack 1.19.03.18

By on 18/03/2019 in News
New in Flapjack 1.19.03.18

Flapjack has just been updated to version 1.19.03.18. NEW: Flapjack now uses Java 11 (JRE11). There will be no more 32bit versions of Flapjack. NEW: Added initial support for direct loading of Intertek-formatted genotype files. NEW: Added a data set count to the title panel of the navigation pane. NEW: The status panel now displays […]

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New in Flapjack 1.18.06.29

By on 29/06/2018 in News
New in Flapjack 1.18.06.29

Flapjack has just been updated to version 1.18.06.29. CHG: The truncate long line names and long trait values dialogs now use number spinners rather than slider controls. CHG: Implemented a better way of parsing trait data to ensure we get a better idea of whether the data for a given column is numerical or categorical. […]

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New in Flapjack 1.18.06.13

By on 13/06/2018 in News
New in Flapjack 1.18.06.13

Flapjack has just been updated to version 1.18.06.13. NEW: Flapjack is now BrAPI (https://www.brapi.org) enabled. NEW: Added a new menu option to import via BrAPI to the File menu. NEW: Added a new analysis module to perform line-based pedigree verification. NEW: Added an option to use a SOCKS proxy rather than a normal HTTP proxy. […]

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New in Flapjack 1.16.10.31

By on 31/10/2016 in News
New in Flapjack 1.16.10.31

Flapjack has just been updated to version 1.16.10.31. NEW: Implemented a new analysis method for calculating marker assisted back crossing (MABC) statistics. NEW: Implemented MABC stats for recurrent parent percentage and linkage drag. NEW: Added a initial dialog for MABC to enable selection of parent lines and MABC parameters. NEW: MABC statistics are displayed in […]

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