Information & Computational Sciences

Tag: genotyping

New in Flapjack 1.19.07.04

By on 09/07/2019 in News
New in Flapjack 1.19.07.04

Flapjack has just been updated to version 1.19.07.04. NEW: Enabled an early version of a Forward Breeding Analysis.

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New in Flapjack 1.19.03.18

By on 18/03/2019 in News
New in Flapjack 1.19.03.18

Flapjack has just been updated to version 1.19.03.18. NEW: Flapjack now uses Java 11 (JRE11). There will be no more 32bit versions of Flapjack. NEW: Added initial support for direct loading of Intertek-formatted genotype files. NEW: Added a data set count to the title panel of the navigation pane. NEW: The status panel now displays […]

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New in Flapjack 1.18.06.29

By on 29/06/2018 in News
New in Flapjack 1.18.06.29

Flapjack has just been updated to version 1.18.06.29. CHG: The truncate long line names and long trait values dialogs now use number spinners rather than slider controls. CHG: Implemented a better way of parsing trait data to ensure we get a better idea of whether the data for a given column is numerical or categorical. […]

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New in Flapjack 1.18.06.13

By on 13/06/2018 in News
New in Flapjack 1.18.06.13

Flapjack has just been updated to version 1.18.06.13. NEW: Flapjack is now BrAPI (https://www.brapi.org) enabled. NEW: Added a new menu option to import via BrAPI to the File menu. NEW: Added a new analysis module to perform line-based pedigree verification. NEW: Added an option to use a SOCKS proxy rather than a normal HTTP proxy. […]

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New in Flapjack 1.16.10.31

By on 31/10/2016 in News
New in Flapjack 1.16.10.31

Flapjack has just been updated to version 1.16.10.31. NEW: Implemented a new analysis method for calculating marker assisted back crossing (MABC) statistics. NEW: Implemented MABC stats for recurrent parent percentage and linkage drag. NEW: Added a initial dialog for MABC to enable selection of parent lines and MABC parameters. NEW: MABC statistics are displayed in […]

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New in Flapjack 1.16.03.04

By on 04/03/2016 in News
New in Flapjack 1.16.03.04

Flapjack has just been updated to version 1.16.03.04. NEW: (Experimental) Updated much of Flapjack’s UI to utilize 4K displays (probably Windows only for now). NEW: Added options to the Preferences dialog to control UI scaling. NEW: A trait’s categorical or numerical status is now reflected in its column header (and tooltip). NEW: Tooltip headers are […]

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New in Flapjack 1.15.08.31

By on 31/08/2015 in News
New in Flapjack 1.15.08.31

Flapjack has just been updated to version 1.15.08.31. NEW: Updated all the installers to include the latest version of Java. NEW: The traits table will now show the heatmap colours behind each table cell. NEW: Flapjack can now load HDF5 files that are of a specific Flapjack defined format (experimental). NEW: Importing of large genotype […]

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New in Flapjack 1.15.04.27

By on 27/04/2015 in News
New in Flapjack 1.15.04.27

Flapjack has just been updated to version 1.15.04.27. BUG: Fixed an issue with importing SSR style data where the number of possible allele states can get very high.

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New in Flapjack 1.15.03.02

By on 02/03/2015 in News
New in Flapjack 1.15.03.02

Flapjack has just been updated to version 1.15.03.02. CHG: Importing of very large genotype files is now significantly faster. BUG: Fixed some NPE/HTTP 500 issues with the remote analysis services when using OS X or Linux clients.

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New in Flapjack 1.14.09.24

By on 24/09/2014 in News
New in Flapjack 1.14.09.24

Flapjack has just been updated to version 1.14.09.24. NEW: Implemented a new graph based view of each chromosome selectable from the Chromosomes Panel. NEW: Optimised the hiding lines and markers code so it is now significantly faster. NEW: The list of chromosomes is now always sorted and presented alphabetically. NEW: Added a progress tracker dialog […]

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