barSeed - Barley Seed Development Database

Probe ABC32938

Source Contig ABC32938

barSeed

Links

Affymetrix Source Sequence (379 bp)

>ABC32938 379
GGTTGTATGTCGTGTACAAGGGTAAGGTGGGTAAGGTTCTCGGAGTCTACGACGACTGGG
AGGAGTGTCGGAGACAGGTTCACCGTTTCAGCGGTAACAGTTACAAAGGGTACACCACAA
GGGCGGAGGCGGAAGTTAGATACGCGCGCTATCTAGCGGAAGAGAGGACGGAGCGTTGGA
GGAACCGGATGAAGACCAGTTTCATCGCGATTATGCTCATCGTGATGACCGCAGCTCTCT
TTTATGTGATGCTAGTTTAGATGATCGATATCGACTTGTAATGTAAAGAGAAACTCGCTA
CTCGCAGTCTCGAGACTTGTAATGTTCTAACTTTGTTCGGTATTTTAAATTCGGAGACTA
ATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK375665	921	6e-147	559 - 891	95	316 / 333	None	ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC39062 ABC41020 ABC43517 ABC49701
AK355554	797	3e-130	489 - 782	95	280 / 294	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK362294	1381	3e-120	1081 - 1359	95	264 / 279	CUST_10588_PI390587928 CUST_64_PI415269222	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC24714 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK354213	708	8e-116	425 - 686	95	250 / 262	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC04148 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK250044.1	1508	6e-112	1138 - 1413	93	257 / 276	CUST_19173_PI390587928	ABC01481 ABC01962 ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01977 ABC02389 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517
AK251482.1	1651	2e-111	1306 - 1569	94	249 / 264	CUST_6650_PI390587928 CUST_21677_PI390587928	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK375073	933	1e-78	638 - 929	85	263 / 310	None	ABC01971 ABC01976 ABC01977 ABC02466 ABC02467 ABC02468 ABC32938 ABC41020
AK361796	1608	2e-66	1288 - 1481	90	176 / 195	None	ABC01481 ABC01482 ABC01971 ABC01972 ABC01976 ABC01977 ABC32938 ABC41020 ABC42385 ABC43517
AK252912.1	2576	2e-56	2388 - 2535	94	139 / 148	CUST_5116_PI390587928 CUST_23105_PI390587928	ABC01965 ABC01966 ABC01968 ABC01971 ABC01977 ABC02389 ABC09455 ABC11496 ABC12720 ABC24152 ABC32938 ABC38666 ABC41020 ABC43517 ABC49701