barSeed - Barley Seed Development Database

Probe ABC02389

Source Contig ABC02389

barSeed

Links

Affymetrix Source Sequence (593 bp)

>ABC02389 593
GTAGCCTTGGTGTTATAATCACAGAGATACTGACGGGACAGAATGGATATCATGATGTTG
AGCATAGCGAAACATGGCCCACAACGATGAGGCCGGCGGTTCGGGCAAGGCATTCTGGGA
GCTGTCCCAGGAGATGGAGGAAGAACCTCACCGCTATGAGGACGTCGTGGAAGACACCGA
TCCCGACTACACAACCCCTAGTGGCGTTGGGGATGACACCACTGATGGTGCCGTCGAGGA
TGCCACCACTGATGATGGCAGCGCACGCACAGATGACAGGTTCGGCGTTTCAACAATAAC
AGTTACAAAGGGTACACCACTAGGGCGGAGGCGGAAGTTAGATACACGCGCTATCTAGCG
GGAGAGAGGAGGGAGCGTTGGAGGAACCGGATGAAGACCATTTTCATCGCGATTATGCTC
ATCGTGATGACCGCATCTCTCTTCTATGTGATGGTAGTTTAGATGATCGATACCGACTTG
TAATGTGAAGACAAACTCGCTAATCGTGGTCTCGAGACTTGTAATGTTCTAACTTTGTTC
AGTATTTTAAATTCGGAGACTAATATGATGAATTGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355554	797	6e-124	518 - 794	96	265 / 277	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK362294	1381	2e-123	1081 - 1371	94	274 / 291	CUST_10588_PI390587928 CUST_64_PI415269222	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC24714 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK354213	708	1e-120	425 - 698	95	261 / 274	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC04148 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK251482.1	1651	8e-118	1306 - 1581	95	261 / 276	CUST_6650_PI390587928 CUST_21677_PI390587928	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK375665	921	1e-116	598 - 891	93	273 / 295	None	ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC39062 ABC41020 ABC43517 ABC49701
AK250044.1	1508	5e-85	1182 - 1429	90	223 / 248	CUST_19173_PI390587928	ABC01481 ABC01962 ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01977 ABC02389 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517
AK252912.1	2576	2e-59	2388 - 2547	93	149 / 160	CUST_5116_PI390587928 CUST_23105_PI390587928	ABC01965 ABC01966 ABC01968 ABC01971 ABC01977 ABC02389 ABC09455 ABC11496 ABC12720 ABC24152 ABC32938 ABC38666 ABC41020 ABC43517 ABC49701