barSeed - Barley Seed Development Database

Probe ABC04148

Source Contig ABC04148

barSeed

Links

Affymetrix Source Sequence (1427 bp)

>ABC04148 1427
GCCACGGCAACCAGTTCCCCTTCCAGCCCTTGAGCCAACCAGCCACCCTCTTTGATCGAT
CGTTCGGCGGCGATGGCGGTGGATCTGACCCCGAGGCAGCCGGCAAAGGCGTACGGCGGC
GAGGGCGGCGCCTACTACGAGTGGAGCCCGGCCGAGCTGCCCATGCTCGGCGTCGCCTCC
ATCGGCGCCGCCAAGCTCTCGCTCGCCGCCGGCGGCATGTCGCTCCCCAGCTACTCCGAC
TCCGCCAAGGTCGCCTACGTCCTCCAAGGCAAGGGAACCTGCGGCATTGTGCTGCCTGAG
GCCACCAAGGAGAAGGTGGTCGCCGTGAAGGAGGGTGACGCTCTGGCGCTCCCCTTTGGG
GTGGTCACCTGGTGGCACAACACCCCCGAGTCTGCCACTGAGCTCGTCGTCCTCTTCCTC
GGCGACACCTCCAAGGGCCACAGGCCTGGCCAGTTCACCAACTTCCAGCTCACCGGTGCC
AGCGGTATCTTCACCGGCTTCTCCACCGAGTTTGTCGGCCGTGCCTGGGACCTCAAGGAG
GACGACGCTGCCAAGCTCGTCTCCAGCCAGCCAGCCTCTGGCATTGTTAAGCTCTCTGCC
GGGCAGAAGCTGCCGGAGCCGGTTGATGCTGACCGCAAGGACATGGCCCTCAACTGCCTT
GAGGCCAAGCTTGACGTGGACATCCCCAACGGTGGCCGCGTGGTGGTGCTCAACACGGTG
AACCTGCCCCTGGTGAAGGAGGTTGGACTCGGTGCTGACCTTGTCAGGATCGACGCCCAC
TCCATGTGCTCCCCGGGCTTCTCCTGTGACTCAGCGTACCAGGTGACCTACATCGTCCGT
GGCAGCGGCCGTGTTCAGGTCGTTGGCCCTGACGGCAAACGCGTGCTGGAGACCCGCATT
GAGGGCGGCAGCCTCTTCATTGTGCCCCGCTTCCACGTCGTGTCCAAGATCGCTGATGCC
TCTGGCATGGAGTGGTTCTCTATCATCACCACCCCCAACCCGATCTTCAGCCACCTTGCT
GGGAAGACCTCGGTGTGGAAGGCCATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACACC
ACGCCGGAGATGGAGAAGCTCTTCCGGTCCAAGAGGCTGGACTCCGAGATTTTCTTCGCC
CCCAACTAGGAGCCATTCGTCGCGCATCGGCCGGTCGCCTTAGGCAGGAATAAATAAATT
TTAGTTAGGAGATTGAAACTCTATGGGCGTGATTGAGTCTGTTGGTTGAGCTGCTGGTGG
TTTTAATCGATCACCTCTGCGAATCTATCTTAGTTCCTCCTGGCAGAACAGAATGTTGCT
GTCGGGTCGTCGTCGGTTAAATCGAGTGTGAGTGTTTGTTGCCGGCCGATCTGGGCTCAG
AACTGATGAATGCAATCGACCGTTAAATTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK363288	1442	0.0	28 - 1437	99	1403 / 1410	None	ABC04148 ABC29917
MLOC_66606.1	2555	0.0	47 - 1190	99	1137 / 1144	CUST_7749_PI390587928	ABC04148 ABC15143 ABC29917 ABC48483
MLOC_74956.1	617	1e-179	135 - 614	90	434 / 480	CUST_24132_PI390587928	ABC04148
MLOC_81180.1	463	1e-94	256 - 463	97	205 / 212	None	ABC04148
AK354213	708	1e-93	103 - 316	96	206 / 215	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC04148 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
MLOC_33910.1	1606	1e-93	1388 - 1601	96	206 / 215	None	ABC04148
MLOC_2415.1	236	3e-86	27 - 236	94	199 / 211	None	ABC04148