barSeed - Barley Seed Development Database

Probe ABC34124

Source Contig ABC34124

barSeed

Links

Affymetrix Source Sequence (447 bp)

>ABC34124 447
GCAGAGGAGCAGCAACAGCTAGTTCTTCAGGTGCAATGGAAATCAAGCAAGCTTATATCT
GAAAAATGAGTTAGCTAGGCTCAAAAATTGAGTTGGCCCCTTTACATATGCTATCTGAAA
AATGACTTAGCTAGTCATCTAAGTTGAGCTGATTTTGATTTCCGTATGTTATGGGGGACA
ACAGATATTGCTATATGTTCATTCTTTAGGGTACAGACTTGCTAAACGCGCGCTATCTAG
CGGGAGAGAGGAGGGAGCGTTGGAGGAACCGAATGAAGACCAGTTTCATCGCGATTATGC
TCATCGTGATGACCACAGCTCTCTTCTATGTGATGTTAGTTTAGATGATCGATATCGACT
TGTAATGTGAAGACAAACTCGCTACTCGCGGTCTCGAGACTTGTAATGTTCTAACTTTGT
TTGGTATTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_58854.1	317	7e-97	18 - 246	95	217 / 229	None	ABC07217 ABC15446 ABC34124 ABC39062
AK354213	708	1e-95	465 - 672	97	202 / 208	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC04148 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK375187	926	2e-93	619 - 847	94	215 / 229	None	ABC07217 ABC07219 ABC07518 ABC15446 ABC34124 ABC39062 ABC41020
AK355554	797	2e-92	561 - 768	96	200 / 208	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK362294	1381	1e-90	1138 - 1345	96	199 / 208	CUST_10588_PI390587928 CUST_64_PI415269222	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC24714 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK375665	921	1e-90	671 - 878	96	199 / 208	None	ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC39062 ABC41020 ABC43517 ABC49701
AK354227	894	2e-88	640 - 868	93	212 / 229	CUST_4907_PI390587928	ABC07217 ABC07219 ABC07518 ABC15446 ABC34124 ABC39062
AK357637	1380	2e-88	1078 - 1306	93	212 / 229	CUST_4907_PI390587928	ABC07217 ABC07219 ABC07518 ABC15446 ABC34124 ABC39062
MLOC_58959.1	351	2e-88	60 - 288	93	212 / 229	CUST_4907_PI390587928	ABC07217 ABC07219 ABC07518 ABC15446 ABC34124 ABC39062
AK251482.1	1651	1e-84	1346 - 1555	94	197 / 210	CUST_6650_PI390587928 CUST_21677_PI390587928	ABC01965 ABC01966 ABC01968 ABC01972 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
MLOC_7287.1	226	8e-67	1 - 160	96	153 / 160	None	ABC15446 ABC34124
AK250044.1	1508	4e-65	1251 - 1429	92	165 / 179	CUST_19173_PI390587928	ABC01481 ABC01962 ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01977 ABC02389 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517
MLOC_69386.1	144	2e-58	1 - 136	97	132 / 136	None	ABC15446 ABC34124
MLOC_2992.1	144	6e-58	1 - 144	95	137 / 144	None	ABC15446 ABC34124