barSeed - Barley Seed Development Database

Probe ABC01976

Source Contig ABC01976

barSeed

Links

Affymetrix Source Sequence (518 bp)

>ABC01976 518
TTCACGAGTCACCAACAAAGGAGCGGCGGCGGCGGCCCGGCGGCCGGCGGCGCGCGTCGA
GCACAAAGGAGGCCAGGACCAAGCGGCAGGCCGGCGACCAGCGCCACCTTTGTCTTTTTC
GCTGCCGATTCCTCCCCAGAGATGTTGTCGTATGTCGTGTACAAGGGTGAGGTTCCCGGA
GTCTACGACGATTGGGAGGAGTGTCGGAGACAGGTTCACCGTTTCAGCGGTATCAGTTAC
AAAGGGTACACCACTAGGGCAGAGGCGGAAGCTAGATACGCGCGCTATCTAGCGGGAGAG
AGGAAGGAGCGGAGGAGGAACCGGATGAAGATCGGTTTCATCACGATGATGCTCATCGTG
ACCGCAACCCTCTTCTATTTGATGGTAGTTTAGATATCGACTTGTAATGTGAAGACAAAC
TCGCTACTCGTGGTCTCGAGACTTGTAATGTTCTAACTTTGTTCAGTATTTTGAATTCGG
AGACTAATACGATGAATTGATTCGGAGACTAATCTTCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK375665	921	7e-118	531 - 891	88	319 / 361	None	ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC39062 ABC41020 ABC43517 ABC49701
AK375073	933	5e-109	623 - 929	90	282 / 314	None	ABC01971 ABC01976 ABC01977 ABC02466 ABC02467 ABC02468 ABC32938 ABC41020
AK361796	1608	2e-107	1257 - 1607	87	322 / 372	None	ABC01481 ABC01482 ABC01971 ABC01972 ABC01976 ABC01977 ABC32938 ABC41020 ABC42385 ABC43517
AK355554	797	1e-104	430 - 797	86	326 / 380	None	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK362294	1381	2e-97	1081 - 1381	89	267 / 301	CUST_10588_PI390587928 CUST_64_PI415269222	ABC01965 ABC01966 ABC01968 ABC01972 ABC01976 ABC01977 ABC02389 ABC11496 ABC12720 ABC24714 ABC32938 ABC34124 ABC41020 ABC43517 ABC49701
AK356508	1305	2e-73	1113 - 1305	93	179 / 193	CUST_12846_PI390587928	ABC01971 ABC01976 ABC43517