barSeed - Barley Seed Development Database

Probe ABC02466

Source Contig ABC02466

barSeed

Links

Affymetrix Source Sequence (831 bp)

>ABC02466 831
GGGGAAAGATGCGCTGGATCAGGAACAGGGCCCATCTTGAGTTGTACCCACCATAGCCTC
TGACAACAACATCGGCCTTGCGGGAGTAGGTGTCGGCAAGGGCCGCTCCCCAACCGCCGG
GCGGAAGGACTGCTCAGTGATGGAGTCGCCAAAGAGCACCAGACGTGGCCGCAGCATGTC
TTGGGATCCCGCTCCCCCTGAAGCATCGGCAAGGCAAATGGGACGGTGGCCGGCAGACGG
GGCTGAGGGGCAGGATCCAGGCATCGCCATCGAGGCTGAGCACCTGGTTGCAGGCAGGAG
TATCTAGGGCCCCTATAATTTTGTCTTTCCCCCCTGATCTGCTCCGATCAGGTCATAAGC
GGTTGGCCTCGCGGTGCTGCGTGGCGGAGCACTCCGGGGACCTAGCCGATTAGCTCAGGG
GGGCGGAGAGGGAGCGCCGCCGCGTTCGATTCGGCCGGCGGCGGGCTGAGAAGTTCGAGC
CCAAGTACCGCCTCATCAGGAACGGTCTTGCTACCAAGGTAGAGAAGTCACGCAAGCAGA
TCAAGGAAAGGAAGAACAGAACAAAGAAGATCCGTGGTGTGAAGAAGACCAAGGCCGGAG
ATGCCAAGAAGAAATAAGCACATTTCTGTCTTCATCCTTTCACCATCAGCCTTTGCTTGG
TTTAGCACCGTATCCCTGTGCCAATGTTGCTGAGTGCTTAATTATGACTAGAAAAGACTT
TGCCATTTATGTCATCTCCTGGTATGTTAAAAGGCATTTTGTAGTATCTTATGCTAAGAT
TTTGAGGAAGTTGGTCGGACTATCATATTAAAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_77319.1	2966	0.0	2382 - 2850	99	467 / 469	CUST_36295_PI390587928 CUST_10089_PI390587928	ABC02466 ABC31772
MLOC_77319.3	1973	0.0	1455 - 1923	99	467 / 469	CUST_36295_PI390587928	ABC02466 ABC31772
MLOC_77319.4	2312	0.0	1767 - 2235	99	467 / 469	CUST_10089_PI390587928	ABC02466 ABC31772
MLOC_77319.2	1941	0.0	1357 - 1825	99	467 / 469	CUST_36295_PI390587928	ABC02466 ABC31772
AK250321.1	1324	0.0	33 - 501	99	465 / 469	CUST_18827_PI390587928	ABC02466 ABC31772
MLOC_38744.1	562	2e-174	231 - 562	100	332 / 332	CUST_18828_PI390587928	ABC02466 ABC02467 ABC02468 ABC39104
AK375073	933	2e-80	390 - 605	92	206 / 225	None	ABC01971 ABC01976 ABC01977 ABC02466 ABC02467 ABC02468 ABC32938 ABC41020
MLOC_59705.1	746	2e-80	127 - 342	92	206 / 225	None	ABC02466 ABC02467 ABC02468