barSeed - Barley Seed Development Database

Probe ABC02468

Source Contig ABC02468

barSeed

Links

Affymetrix Source Sequence (787 bp)

>ABC02468 787
CGCCGCCGCCTCTCACTCGCGCCCCTGCCGTAGCTAGGAATTCCTGCGAAGAAGAAGCAC
CTCGAGCATCAGCAGCAGTCATGGCCGACGCGAAGACGGCGCCCGCGGTGACTCTCCGCA
CCCGTAAGTTCATGACGAACCGTCTCCTCTCACGCAAGCAGTTCGTGCTCGAGGTGATCC
ACCCTGGCCGCGCCAACGTGTCCAAGGCGGATCTCAAGGAGCGTCTGGCGAAGATTTACG
AGGTGAAGGACTCGAACTGCATCTTTGTGTTCAAGTTCCGCACCCACTTCGGAGGCGGCA
AGTCCACCGGCTTCGGCCTCATCTATGATAACCTCGAGGCCGCCAAGAAGTTCGAGCCCA
AGTACAGGCTGATCAGGAACGGGCTAGCCACCAAGATAGAGAAGTCACGCAAGCAGATCA
AGGAGAGGAAGAACAGGACAAAGAAGATCCGTGGAGTCAAGAAGACAAAGGCTGGGGATG
CCAAGAAGAAATGAGGAAAGATTCTTGACTGTTGGCTGCTTTCAGTTCTATCTGTTCACA
ATCAGTGTCTGTACCCTTTAGTAAAGCTCTTTGTGGCAATGTCGCAGTATGCTTGATTTA
GTAGAAAAGTGAATTTTGAGCTTTTACATCGTCCCCGGTATGCTGGTTAGTATTACTGAC
TTGATTTTTGCTGCTTGTGTTCTGCTTTCTCAAGTTGAGATGAGTTCATTGAGTGGGTTT
CTCATCCAAAAAAAAAAAAAAAAAGTTTAAGTTGTGGATCTTTTTTTTTCAAAAAAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358970	668	0.0	6 - 668	100	663 / 663	None	ABC02467 ABC02468 ABC31761
MLOC_65825.1	725	0.0	14 - 477	100	464 / 464	None	ABC02467 ABC02468
MLOC_15667.1	1390	2e-139	836 - 1104	100	269 / 269	CUST_18825_PI390587928 CUST_31496_PI390587928	ABC02468 ABC31761
MLOC_38744.1	562	2e-129	1 - 377	89	335 / 377	CUST_18828_PI390587928	ABC02466 ABC02467 ABC02468 ABC39104
MLOC_59705.5	596	3e-88	119 - 488	83	321 / 388	None	ABC02467 ABC02468
AK375073	933	1e-87	88 - 456	83	320 / 387	None	ABC01971 ABC01976 ABC01977 ABC02466 ABC02467 ABC02468 ABC32938 ABC41020
MLOC_59705.1	746	1e-87	276 - 644	83	320 / 387	None	ABC02466 ABC02467 ABC02468
MLOC_59705.3	603	1e-87	127 - 495	83	320 / 387	None	ABC02467 ABC02468
MLOC_59705.2	593	6e-85	188 - 491	86	260 / 304	None	ABC02467 ABC02468
MLOC_59705.4	592	6e-85	181 - 484	86	260 / 304	None	ABC02467 ABC02468