barSeed - Barley Seed Development Database

Probe ABC02467

Source Contig ABC02467

barSeed

Links

Affymetrix Source Sequence (785 bp)

>ABC02467 785
CCGCTTTCCTCCCTCCCGCTCCGCCGCCGCCGCCGCCGCCACCTCCTGCGCAGGCAGCCC
ACCGCGGAGCGAGGTCGAATCAGCCATGGCAGACGCCAAGGCCACGACGGCGGTCACCCT
CCGCACCCGCAAGTTCATGACCAACCGCCTGCTCGCCCGCAAGCAGTTCGTGCTCGAGGT
CATCCACCCCGGCCGCGCCAACGTCTCCAAGGCGGAGCTCAAGGATAGGCTGTCCAAGGT
GTACGAGGTCAAGGACCCCAACTGCATCTTCGTCTTCAAGTTCCGCACCCACTTCGGAGG
CGGCAAGTCCTCCGGATTCGGTCTCATCTACGACAACCTCGAAGCCGCCAAGAAGTTCGA
GCCCAAGTACCGCCTCATCAGGAACGGTCTTGCTACCAAGGTAGAGAAGTCACGCAAGCA
GATCAAGGAAAGGAAGAACAGAACAAAGAAGATCCGTGGTGTGAAGAAGACCAAGGCCGG
AGATGCCAAGAAGAAATAAGCACATTTCTGTCTTCATCCTTTCACCATCAGCCTTTGCTT
GGTTTAGCACCGTATCCCTGTGCCAATGTTGCTGAGTGCTTAATTATGACTAGAAAAGAC
TTTGCCATTTATGTCATCTCCTGGTATGTTAAAAGGCATTTTGTAGTATCTTATGCTAAG
ATTTTGAGGAAGTTGGTCGGACTATCATAAAAAAAAAAAAATATTATACCTGTTGTCGTT
GCTCTTGATTTTGGCCATTGAGTAGTCAAATTGCATTGTGTGGTTTACAAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_38744.1	562	0.0	1 - 562	100	562 / 562	CUST_18828_PI390587928	ABC02466 ABC02467 ABC02468 ABC39104
AK375073	933	0.0	18 - 605	92	565 / 615	None	ABC01971 ABC01976 ABC01977 ABC02466 ABC02467 ABC02468 ABC32938 ABC41020
MLOC_59705.1	746	0.0	127 - 714	92	564 / 615	None	ABC02466 ABC02467 ABC02468
MLOC_59705.5	596	0.0	119 - 558	93	425 / 458	None	ABC02467 ABC02468
MLOC_59705.3	603	0.0	127 - 565	93	424 / 457	None	ABC02467 ABC02468
MLOC_59705.4	592	4e-176	119 - 554	92	421 / 458	None	ABC02467 ABC02468
MLOC_59705.2	593	2e-175	127 - 561	92	420 / 457	None	ABC02467 ABC02468
AK358970	668	6e-135	81 - 497	88	365 / 417	None	ABC02467 ABC02468 ABC31761
MLOC_65825.1	725	2e-124	14 - 402	87	340 / 389	None	ABC02467 ABC02468
MLOC_8747.1	455	1e-77	4 - 192	95	179 / 189	None	ABC02467