Tag: genotyping

Flapjack has just been updated to version 0.10.03.10. NEW: Implemented three new methods of scaling and displaying the chromosome map:      local, global, and classic. NEW: Added a new summary “mini map” display that shows where on the chromosome      the markers currently on screen are. NEW: Gaps in the data set (lines with no […]

Flapjack has just been updated to version 0.09.10.29. NEW: Importing very large chromosomes (> 20,000 markers) is now significantly      quicker. NEW: You can now choose which chromosomes are including when exporting data as      text. NEW: The number of tracks used for QTLs is now dynamic, based on a draggable      slider below their […]

Flapjack has just been updated to version 0.09.10.02. BUG: Fixed a rendering bug that was causing the chromosome map to incorrectly      link its lines to the markers.

Flapjack has just been updated to version 0.09.10.01. NEW: Exported images now include any phenotype heat map and/or QTL visualization      as part of the output. NEW: Added keyboard shortcuts for zooming (CTRL++, CTRL+-). CHG: Made various changes to the installers to improve Linux compatibility and      to provide “What’s New” information at update time. […]

Flapjack has just been updated to version 0.09.09.27. NEW: Added an option for sorting lines alphabetically by their name. CHG: Similarity sorting is now much faster. CHG: Implemented some minor changes to reduce the total number of threads in      use. BUG: Fixed a critical bug that effected QTL data that didn’t have any      […]

Flapjack has just been updated to version 0.09.08.26. NEW: The heatmap of phenotypic trait data now supports any number of displayable      columns (it used to be fixed at three). NEW: QTLs can now be imported that contain supplementary columns of textual data      (previously only numerical was support). NEW: Flapjack now maintains a history […]

Flapjack has just been updated to version 0.09.06.19. NEW: Significant improvements to real-time rendering speeds should be noticeable      to Windows users. NEW: Overview displays are now created much faster than before. NEW: The random colour scheme now has two choices of style (HSB or WebSafe). NEW: A lot more help topics have been added […]

Flapjack has just been updated to version 0.09.03.09. NEW: Flapjack now supports the import of supplementary QTL data. NEW: QTLs data files can have any number of additional (optional) numerical      columns (LOD, r2, etc). NEW: Added support for graphically rendering QTLs across multiple “tracks”. NEW: QTLs can now be colour-coded according to the trait […]

Flapjack has just been updated to version 0.09.02.03. NEW: Flapjack can now read files containing genotype data that does not include      heterozygous separator characters, for example “AT” can be read as “A/T” or      “A” and “T” (depending on import options). CHG: Flapjack is now better at estimating what default colour scheme to use […]

Flapjack has just been updated to version 0.09.01.27. NEW: The line and marker under the mouse is now graphically highlighted on the      main canvas and in the names list. NEW: Lines names in the list are now graphically highlighted as the mouse moves      over the canvas. NEW: Added an option for right-click deletion […]