Information & Computational Sciences

News

New in Germinate 3 Data Importer 1.1.6 and 1.1.7

By on 22/03/2016 in News
New in Germinate 3 Data Importer 1.1.6 and 1.1.7

Germinate 3 Data Importer has just been updated to version 1.1.7. New in 1.1.7 CHG: Selecting a new file after the column mapping has been defined will not clear the mapping. This makes importing multiple files with the same mapping easier. NEW: Added option to import row data while checking for already existing entries in […]

Continue Reading »

New in Flapjack 1.16.03.04

By on 04/03/2016 in News
New in Flapjack 1.16.03.04

Flapjack has just been updated to version 1.16.03.04. NEW: (Experimental) Updated much of Flapjack’s UI to utilize 4K displays (probably Windows only for now). NEW: Added options to the Preferences dialog to control UI scaling. NEW: A trait’s categorical or numerical status is now reflected in its column header (and tooltip). NEW: Tooltip headers are […]

Continue Reading »

New in Germinate Scan 1.2.0

By on 25/02/2016 in News
New in Germinate Scan 1.2.0

Germinate Scan has just been updated to version 1.2.0. NEW: Added new export format options to the settings dialog. NEW: Added option to send exported data by e-mail. NEW: Added runtime permission support for Android Marshmallow. CHG: Theme improvements.

Continue Reading »

New in CurlyWhirly 1.15.12.10

By on 10/12/2015 in News
New in CurlyWhirly 1.15.12.10

CurlyWhirly has just been updated to version 1.15.12.10. CurlyWhirly now has the ability to create groups from Multi-selected points in future versions of Germinate. Fixed issue where category colour changes might not apply correctly. Fixed issue where the colour key / legend might not be produced correctly.  

Continue Reading »

Paper: An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome

By on 13/11/2015 in News
Paper: An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome

Congratulations to Antonio Ribeiro on the publication of his new BMC Bioinformatics paper: An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome Abstract Background Single Nucleotide Polymorphisms (SNPs) are widely used molecular markers, and their use has increased massively since the inception of Next Generation Sequencing […]

Continue Reading »

Book Chapter: Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings

By on 13/11/2015 in News
Book Chapter: Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings

The Tablet team have contributed a chapter to Plant Bioinformatics (2nd Edition): Abstract: This chapter is designed to be a practical guide to using Tablet for the visualization of next/second-generation (NGS) sequencing data. NGS data is being produced more frequently and in greater data volumes every year. As such, it is increasingly important to have […]

Continue Reading »

New in CurlyWhirly 1.15.09.01

By on 01/09/2015 in News
New in CurlyWhirly 1.15.09.01

CurlyWhirly has just been updated to version 1.15.09.01. CurlyWhirly now detects, removes and warns about duplicate data points during data import.  

Continue Reading »

New in Flapjack 1.15.08.31

By on 31/08/2015 in News
New in Flapjack 1.15.08.31

Flapjack has just been updated to version 1.15.08.31. NEW: Updated all the installers to include the latest version of Java. NEW: The traits table will now show the heatmap colours behind each table cell. NEW: Flapjack can now load HDF5 files that are of a specific Flapjack defined format (experimental). NEW: Importing of large genotype […]

Continue Reading »

New in Tablet 1.15.08.28

By on 28/08/2015 in News
New in Tablet 1.15.08.28

Tablet has just been updated to version 1.15.08.28. NEW: The read-shadower now highlights all read pairs in addition to reads under the mouse. NEW: Added SHIFT+mouse wheel support, that scrolls the canvas horizontally. NEW: Updated the installers for better Windows 10 and OS X compatibility. NEW: Updated the Java runtime included in the installers to […]

Continue Reading »

New in Strudel 1.15.08.25

By on 25/08/2015 in News
New in Strudel 1.15.08.25

Strudel has just been updated to version 1.15.05.25. NEW: Updated the installers to include the latest versions of the Java Runtime (1.8.0_60). NEW: Updated the installers to include compatibility with the latest versions of OS X. CHG: Removed the SCRI branding from the installers and replaced it with JHI branding.

Continue Reading »

Top