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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24042_PI390587928Hv_44K_v2AGAAGGTGAAGCTCGCCGTCCTCCAGTTCTACAAGGTCGACGATTCCACCGGCAAGGTAA539GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3608647597e-23390 - 4499859 / 60plus ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC49693 ABC50770
MLOCAK3576647353e-21388 - 4479758 / 60plus ABC01035 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01046 ABC01048 ABC01050 ABC01051 ABC01056 ABC01072 ABC01078 ABC01079 ABC01087 ABC01094 ABC01106 ABC01110 ABC01114 ABC01117 ABC22044 ABC39287 ABC49011 ABC49693 ABC50770
Harvest21ABC010796893e-25356 - 41510060 / 60plusABC01079
Harvest21ABC010616343e-25557 - 61610060 / 60plus
Harvest21ABC010417183e-25363 - 42210060 / 60plusABC01041
Harvest21ABC488054661e-23376 - 4359859 / 60plus
Harvest21ABC010665711e-23367 - 4269859 / 60plus
Harvest21ABC010876746e-22359 - 4189758 / 60plusABC01087
Harvest21ABC010697256e-22371 - 4309758 / 60plus
Harvest21ABC010367176e-22376 - 4359758 / 60plusABC01036
Harvest21ABC010387638e-21366 - 4239756 / 58plusABC01038
Harvest35U35_416986173e-25540 - 59910060 / 60plus
Harvest35U35_137427303e-25368 - 42710060 / 60plus
Harvest35U35_136837306e-22376 - 4359758 / 60plus
Harvest35U35_385415228e-21124 - 1819756 / 58plus
Harvest35U35_1387210308e-21380 - 4379756 / 58plus



Contig Sequence (617 bp)

>U35_41698 617 Hv_44K_v2
GGGAAGAGGGTGTCAAGCATGGCGTCCAAGGGTCTTCTTGTGTTTGCTCTCCTGCTTGCT
GCTGCTATCCTCGTCGCCTCAACTGAACAAACTAAGGCCAAGAAGGAAGAGAAGAAAGCA
GGCGTAGAGGGCTATGGCGGCGGCGGCGGCTACCCTGGAGGAGGCGGGGGAGGCTACCCA
GGCCACGGTGGAGGAGGAGGCGGCGGCTACCCGGGCCACAGCGCGCGGAGGCGACCGCCC
CACCGCCGCCAAGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGA
GGTGGAGTCCTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCAT
CCCGCCGGACCAGCAACGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCT
CGCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTTCGTGGTGG
TGCCAAGAAGCGCAAGAAGAAGACGTACACCAAGCCCAAGAAGCAAAAGCACAAGCACAA
GAAGGTGAAGCTCGCCGTCCTCCAGTTCTACAAGGTCGACGATTCCACCGGCAAGGTAAC
CCGGCTCAGGAAGGAGT



Homology of Contig U35_41698 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi2g12280.11565e-51
Arabidopsis v10None