- Probe CUST_14543_PI390587928
- Source Contig U35_13801
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_14543_PI390587928 | Hv_44K_v2 | GTTTTGCTGCTCCTCAGGATGTTGAACCTTGGTTACTCTAGATGAGTACTTGGCCTTGTT | 299 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK251133.1 | 706 | 2e-24 | 472 - 531 | 100 | 60 / 60 | plus | ABC01030 ABC01036 ABC01038 ABC01040 ABC01041 ABC01042 ABC01044 ABC01048 ABC01050 ABC01051 ABC01056 ABC01063 ABC01072 ABC01079 ABC01086 ABC01106 ABC01108 ABC01114 ABC22044 ABC50770 |
MLOC | MLOC_33664.2 | 2257 | 2e-24 | 1914 - 1973 | 100 | 60 / 60 | plus | ABC01040 |
MLOC | MLOC_33664.1 | 335 | 2e-24 | 180 - 239 | 100 | 60 / 60 | plus | ABC01040 |
JLOC1 | JLOC1_21780.1 | 740 | 8e-25 | 320 - 379 | 100 | 60 / 60 | plus | |
Harvest21 | ABC52363 | 446 | 3e-25 | 354 - 413 | 100 | 60 / 60 | plus | |
Harvest21 | ABC01093 | 359 | 3e-25 | 300 - 359 | 100 | 60 / 60 | plus | |
Harvest21 | ABC01040 | 801 | 3e-25 | 465 - 524 | 100 | 60 / 60 | plus | ABC01040 |
Harvest35 | U35_50282 | 446 | 3e-25 | 354 - 413 | 100 | 60 / 60 | plus | |
Harvest35 | U35_13846 | 1571 | 3e-25 | 1226 - 1285 | 100 | 60 / 60 | plus | |
Harvest35 | U35_13801 | 359 | 3e-25 | 300 - 359 | 100 | 60 / 60 | plus |
Contig Sequence (359 bp)
>U35_13801 359 Hv_44K_v2 CAAGATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGAG CAGCGACACCATCGACAATGTCAAGGCCAAGATCCAGGCCCTCGCCCGCAAGTACAACCA GGAGAAGATGATCTGCCGCAAGTGCTACGCTAGGCTGCATCCAAGGGCTGTCAACTGCCG CAAGAAGAAGTGTGGCCACAGCAACCAGCTGAGGCCCAAGAAGAAGATCAAGAACTAGGC TGATTGTTGCTTTCGTTGTCTGGATAAATCAGTAGACATAAAAATATTTTCCGGTTATCG TTTTGCTGCTCCTCAGGATGTTGAACCTTGGTTACTCTAGATGAGTACTTGGCCTTGTT
Homology of Contig U35_13801 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |