- Probe CUST_26050_PI390587928
- Source Contig U35_48125
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_26050_PI390587928 | Hv_44K_v2 | TATGGACATGAAGGCATTTGATTTAGTGCCAAATATTACTTACTAATGCCCGCAAAGTAT | 109 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK355775 | 1429 | 2e-24 | 1294 - 1353 | 100 | 60 / 60 | plus | ABC08511 ABC15629 ABC38338 ABC39738 ABC40364 ABC40947 ABC47127 |
| MLOC | AK365735 | 2167 | 7e-23 | 1973 - 2032 | 98 | 59 / 60 | plus | ABC04150 ABC08511 ABC09815 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | AK367312 | 2059 | 7e-23 | 1835 - 1894 | 98 | 59 / 60 | plus | ABC08511 ABC12319 ABC12520 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | AK358152 | 2916 | 7e-23 | 2769 - 2828 | 98 | 59 / 60 | plus | ABC08511 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | AK367942 | 3453 | 7e-23 | 3185 - 3244 | 98 | 59 / 60 | plus | ABC04150 ABC08511 ABC09815 ABC12319 ABC15629 ABC24189 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | MLOC_74548.1 | 244 | 7e-23 | 2 - 61 | 98 | 59 / 60 | plus | ABC08511 ABC12319 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | MLOC_28953.1 | 293 | 7e-23 | 31 - 90 | 98 | 59 / 60 | minus | ABC26165 |
| MLOC | MLOC_7626.1 | 195 | 7e-23 | 28 - 87 | 98 | 59 / 60 | plus | ABC08511 ABC12319 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | MLOC_50604.1 | 727 | 9e-22 | 637 - 694 | 98 | 57 / 58 | plus | ABC38338 ABC39738 ABC40364 |
| MLOC | AK369022 | 2472 | 3e-21 | 2186 - 2245 | 97 | 58 / 60 | plus | ABC08511 ABC11812 ABC12319 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127 |
| MLOC | AK363441 | 2640 | 3e-21 | 2446 - 2505 | 97 | 58 / 60 | plus | ABC08511 ABC12319 ABC12682 ABC15629 ABC24189 ABC26165 ABC38338 ABC39103 ABC39738 ABC40107 ABC40364 ABC40947 |
| MLOC | AK356842 | 2274 | 3e-21 | 2127 - 2186 | 97 | 58 / 60 | plus | ABC08511 ABC14874 ABC15629 ABC26165 ABC38338 ABC39738 ABC40364 ABC40947 ABC47127 |
| MLOC | MLOC_78574.1 | 206 | 3e-21 | 130 - 189 | 97 | 58 / 60 | minus | ABC08511 ABC12319 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 |
| MLOC | MLOC_31077.4 | 1497 | 3e-21 | 1411 - 1470 | 97 | 58 / 60 | plus | ABC14874 ABC38338 ABC39738 ABC40364 |
| MLOC | MLOC_31077.3 | 2203 | 3e-21 | 2113 - 2172 | 97 | 58 / 60 | plus | ABC14874 ABC26165 ABC38338 ABC39738 ABC40364 |
| MLOC | MLOC_31077.1 | 2460 | 3e-21 | 2370 - 2429 | 97 | 58 / 60 | plus | ABC14874 ABC26165 ABC38338 ABC39738 ABC40364 |
| MLOC | MLOC_31077.2 | 1362 | 3e-21 | 1272 - 1331 | 97 | 58 / 60 | plus | ABC14874 ABC26165 ABC38338 ABC39738 ABC40364 |
| MLOC | MLOC_31064.1 | 316 | 3e-21 | 235 - 294 | 97 | 58 / 60 | plus | None |
| JLOC1 | JLOC1_49684.1 | 244 | 4e-23 | 3 - 62 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_42276.1 | 262 | 4e-23 | 170 - 229 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_27495.1 | 160 | 4e-23 | 31 - 90 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_19343.1 | 291 | 4e-23 | 29 - 88 | 98 | 59 / 60 | minus | |
| JLOC1 | JLOC1_5042.1 | 196 | 4e-23 | 29 - 88 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_1827.1 | 257 | 4e-23 | 136 - 195 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_1436.1 | 106 | 4e-23 | 34 - 93 | 98 | 59 / 60 | minus | |
| JLOC1 | JLOC1_601.1 | 254 | 4e-23 | 182 - 241 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_52369.1 | 194 | 2e-21 | 119 - 178 | 97 | 58 / 60 | minus | |
| JLOC1 | JLOC1_20468.6 | 1748 | 2e-21 | 1658 - 1717 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20468.5 | 1357 | 2e-21 | 1267 - 1326 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20468.4 | 2196 | 2e-21 | 2106 - 2165 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20468.3 | 1512 | 2e-21 | 1422 - 1481 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20468.2 | 1362 | 2e-21 | 1272 - 1331 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20468.1 | 2460 | 2e-21 | 2370 - 2429 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_20462.1 | 308 | 2e-21 | 227 - 286 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC08511 | 614 | 3e-25 | 95 - 154 | 100 | 60 / 60 | minus | ABC08511 |
| Harvest21 | ABC52943 | 321 | 1e-23 | 146 - 205 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC12320 | 661 | 1e-23 | 389 - 448 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC52220 | 548 | 6e-22 | 448 - 507 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC40947 | 589 | 6e-22 | 149 - 208 | 97 | 58 / 60 | minus | ABC40947 |
| Harvest35 | U35_48125 | 486 | 3e-25 | 110 - 169 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_17790 | 1397 | 3e-25 | 1246 - 1305 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_45434 | 663 | 1e-23 | 389 - 448 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_2586 | 503 | 1e-23 | 385 - 444 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_50179 | 548 | 6e-22 | 448 - 507 | 97 | 58 / 60 | plus | |
| Harvest35 | U35_47213 | 643 | 6e-22 | 106 - 165 | 97 | 58 / 60 | minus | |
| Harvest35 | U35_41272 | 703 | 6e-22 | 148 - 207 | 97 | 58 / 60 | minus |
Contig Sequence (486 bp)
>U35_48125 486 Hv_44K_v2 TTTTTTTTTTTTTTTTTGCATACATCCAAAATTCCATAGCATCCATATATACATATAGTT CCATAGCATCCATACATACATAGCTCCATAGCAAATATAATACACAGCGATACTTTGCGG GCATTAGTAAGTAATATTTGGCACTAAATCAAATGCCTTCATGTCCATATCTGCTAAAAA ATGGAACACTAATTTTGGCATCATAGACTACGCAGTGCTTGCTATCTGCTCAAGCGCTGT GTGAAAAAAATGCTAACATTTTAGATAGCAGTAAAATGAGACTCGGAAGAATTCAGCACT GTGACAAATGTGTGGATTCTTTCAATATTCAGCACGGGCAAATTCAGCACTTGGTTGTGT GTCAAGTAAAGTTCGAATGGGTCCATGAAACATCGCGAAAAGCGAATGAGATTCTTTCAA TATTCCTTGCAATGCCCACAAGCGAACTAAGATCGCAGATGCTTCATCCAGCGTCGGCTT GCTTTG
Homology of Contig U35_48125 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |