barSeed - Barley Seed Development Database

Probe ABC11812

Source Contig ABC11812

barSeed

Links

Affymetrix Source Sequence (1208 bp)

>ABC11812 1208
CCCGCCGCGCGGCCTCCTACCCCTTCCCACCCACCCGCCGACGGATCTCCGGATCTGGGT
GGCCTCGGCGCCCGCGGCCCCAACGGCACCTCCCCCGCCCCACCCGCAGCTGCCTCGGAT
CCCCGGCCGTGCGCCGCGTCCCGCCGCGCTGGTGACCCGGCGTCGTCGGGCCCAGCCCTC
GCCCCGCCGCCCTCGCAGGCGCCTCCCTCGTCTTCAGGGGTCGCCGCGCCGTCCTCCGCC
CCTCGCCTCGCCTCCCCTCTGGCCCTCGCCTCGCCGCGGCTGGGCTGTGCCTGCAAGCTT
GTCCAGGGTTTAATATTTTCCTGGTTGCACTACTAGACGTGAAGGATGTTTGTTCTGAGC
CAGATTGAGCACAACCTGCCGATGCCTCCGCACTTGCTGAATCGCCCTCTTGTTGACGCC
ATCAAGTCCGAGCTCGAGAGACTCTTCCTGGATAAGGTGGTTGCAAATCTCGGGCTCTGC
GTGTCTGTCTATGACATCCGTAAAGTCGAAGGAGGATTCATCTTTCCAGGAGAGGGTTGC
TCGACGTACACAGTTTCCTTTAGGTTATTGATGTTCAGGCCCTTTATTGGGGAGGTTCTT
GTTGGGAAGATCAGTGGATATGATGAGAAGGGCTTACAAGTTTCACTTGATTTTTTCAGC
GATATATGCATTCCGGGACACTTGATGCAATTTGGCACAGTGAGGGGAGAGGACGGCAGG
TGGGCGTTGAAGACTGAAGATGGTGATGAACTTCCTCTTGACATTGATGACGAGATACGA
TTCTTGGTGTCCAGCATAAAGTACCCACCTATACCAGTTGAGCAAAAGGAGGATGACAGG
CCATTTGCTCCAATGCAGATAAATGGAAGTATTAAAGGAGATGGTCTTGGCCTTCTTGCC
TGGTGGGCGCCCGATGAAGAAGAAGAAGAGGGCGATGAAGAGGGCGAGGGTGAGGAAGAG
CAATAATAGCAAGTTGTTTGTGGGAACATTTTTATGCAACTTTGTAGTATCGCAGTTTCA
CTGGCAAGTAAAGAAGAAAAATGGTCAGACTCGAAGTGGGAAATACTACATCGCACTTTG
AGACATCCTAGCTAGTTCCGGGGAAATACCCTTTGGCTCATGGGTGTATATGTGGATTTA
TTTTTTAATTAACTAGCAAAAGGGCACGGGAGAAAAAAATACCACACTTTTAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376987	1257	0.0	63 - 1238	99	1161 / 1177	None	ABC11812
MLOC_23699.1	599	0.0	102 - 599	100	498 / 498	None	ABC11812
MLOC_23699.2	485	0.0	4 - 485	100	482 / 482	None	ABC11812
MLOC_21960.1	1263	0.0	1 - 424	99	418 / 424	None	ABC11812
AK369022	2472	8e-81	115 - 367	88	241 / 274	CUST_20419_PI390587928 CUST_25002_PI390587928 CUST_19886_PI390587928 CUST_26050_PI390587928	ABC08511 ABC11812 ABC12319 ABC15629 ABC26165 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127