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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15698_PI390587928Hv_44K_v2TATTTAATTTTCTCTGTCTATGCAAATGTACAACAGGAGCAAGTTCTTGATAGACAGGAC412GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_1753.135782e-241838 - 189710060 / 60plus ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
MLOCMLOC_10897.318942e-24572 - 63110060 / 60plus ABC20013
MLOCMLOC_1753.318002e-241543 - 160210060 / 60plus None
MLOCAK36873427353e-212089 - 21489758 / 60plus ABC12319 ABC38338 ABC39738 ABC40107 ABC40364 ABC40947 ABC47127
MLOCMLOC_77207.522263e-211432 - 14919758 / 60plus None
MLOCMLOC_77207.220633e-211440 - 14999758 / 60plus None
MLOCMLOC_77207.418623e-211435 - 14949758 / 60plus None
MLOCMLOC_77207.321663e-211436 - 14959758 / 60plus None
MLOCMLOC_77207.120433e-211441 - 15009758 / 60plus None
JLOC1JLOC1_1067.318818e-251549 - 160810060 / 60plus
JLOC1JLOC1_51494.727032e-212068 - 21279758 / 60plus
JLOC1JLOC1_51494.526592e-212121 - 21809758 / 60plus
JLOC1JLOC1_51494.225592e-212157 - 22169758 / 60plus
JLOC1JLOC1_51494.127402e-212163 - 22229758 / 60plus
Harvest21ABC516265703e-25413 - 47210060 / 60plus
Harvest35U35_497365703e-25413 - 47210060 / 60plus



Contig Sequence (570 bp)

>U35_49736 570 Hv_44K_v2
CGCTGACCCTAAGCATGTGGAGGCGGTGCAGCTGCACAGGGCCCCCAATCGTTAAGGGCC
CCGACTCAGGATTTGGTGGACCTGCAACTGGCTCATTACTGAAGCTGATTTTGATTCTGG
GACCTGCAACTGGCTCATTACTAAATATTTTTTCACCATATTCTAGTCTCTGTAATTTTG
ATTCCCGTATTTACACTATTCATTGCAAACACGCCCCATCACTAAAGTCAGAAAATATTA
TTTGGTTCCCGATTTGGCTACGGGATAAGGAGTGGACCATCTTGATGTGTATTCTGAATT
TAGACCGGTGACTGGAGATGGGGACTGTTTCTACAGGAGCTTCATATTTTCCTACCTTGT
AATCGAGTAATTGTTCTTCTCTCTTTTCCTTCTAATAGGATATAGATTTACTTATTTAAT
TTTCTCTGTCTATGCAAATGTACAACAGGAGCAAGTTCTTGATAGACAGGACACACTTGA
GGAACACCGTCTCCTTGATGCTGTTAAAAGAGTGTCTTTGCAACATGCAGATCTTAGATG
GACCTCTGAATTTCCCAGGAGCTACAGAGC



Homology of Contig U35_49736 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None