barSeed - Barley Seed Development Database

Probe ABC49876

Source Contig ABC49876

barSeed

Links

Affymetrix Source Sequence (356 bp)

>ABC49876 356
AAGATCGACAGGCGATCAGGTAAGAAGCTGGAGGCCTTGCCCAAGTTCCTCAAGAATGGT
GATGCTGGTATAGTGAAGATGATTCCCACCAAGCCCATGGTTGTGGAGACCTTTGCCACT
TACCCTCCTCTTGGTCGTTTTGCTGTAAAAAACATGAGGCAAACTGTGCGCTGTTGGTGT
CATCAAGGGCGTGGAGAAGAAGGACCCCACCGGAGCCAAGGTGACCAAGGCTGCCATCAA
GAAGAAATAGAGGCGTTTACGTGAATCCCCTATGTCTGCTAAAAGATCTCTCTAGTAGTT
TAGTAAGTTTTGCTACTGTTAGTGCGGTGTCACATGAACCCTGTTGATGTGTCATT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356416	1570	5e-152	1158 - 1515	94	337 / 359	CUST_42286_PI390587928 CUST_14530_PI390587928	ABC00024 ABC00397 ABC00459 ABC00576 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC38458 ABC49622 ABC49876
AK360723	1628	2e-111	1187 - 1431	96	237 / 246	CUST_14530_PI390587928	ABC00024 ABC00397 ABC00459 ABC00576 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC38458 ABC49622 ABC49876
MLOC_31903.3	801	2e-111	422 - 666	96	237 / 246	None	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC38458 ABC49622 ABC49876
MLOC_31903.2	1510	2e-111	775 - 1019	96	237 / 246	CUST_328_PI390587928 CUST_14005_PI390587928 CUST_14530_PI390587928	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC38458 ABC49622 ABC49876
AK250680.1	1601	1e-93	1180 - 1428	92	229 / 250	None	ABC00024 ABC00397 ABC00459 ABC00576 ABC00647 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32623 ABC32857 ABC38458 ABC49622 ABC49876
AK248954.1	1676	1e-89	1165 - 1414	90	228 / 252	None	ABC00024 ABC00397 ABC00459 ABC00576 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC49622 ABC49876
MLOC_3679.2	962	1e-89	366 - 615	90	228 / 252	CUST_34649_PI390587928	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC49622 ABC49876
MLOC_3679.3	906	1e-89	310 - 559	90	228 / 252	CUST_34649_PI390587928	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC49622 ABC49876
MLOC_3679.1	779	1e-89	400 - 649	90	228 / 252	None	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC49622 ABC49876
MLOC_3679.4	1161	1e-89	498 - 747	90	228 / 252	CUST_34649_PI390587928	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC32857 ABC49622 ABC49876
MLOC_31903.1	786	6e-72	619 - 786	96	161 / 168	CUST_14530_PI390587928	ABC00024 ABC00397 ABC00459 ABC00668 ABC00679 ABC00887 ABC00929 ABC00995 ABC49622 ABC49876
MLOC_4488.1	831	2e-66	483 - 685	89	182 / 204	CUST_34456_PI390587928 CUST_15756_PI390587928	ABC00024 ABC00397 ABC00668 ABC00679 ABC00887 ABC32857 ABC49622 ABC49876
MLOC_12278.1	822	1e-63	646 - 822	92	163 / 178	CUST_6670_PI390587928 CUST_40152_PI390587928	ABC00024 ABC00397 ABC00668 ABC00679 ABC00887 ABC32623 ABC32857 ABC49622 ABC49876
MLOC_69283.1	399	2e-61	228 - 399	92	158 / 172	CUST_7363_PI390587928	ABC00668 ABC49876