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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_20789_PI390587928Hv_44K_v2CAAGAGCATATTGTGTGGAGGAAGAGATGAGAAGAATCTTGTGCTTCTCATCCAATCTTT527GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35706839332e-243737 - 379610060 / 60plus ABC00064 ABC00146 ABC00541 ABC00668 ABC18698 ABC36822 ABC39327 ABC53030
MLOCMLOC_1753.135782e-243371 - 343010060 / 60plus ABC05172 ABC12127 ABC12128 ABC30081 ABC34978 ABC34989 ABC44562 ABC46334 ABC49963
MLOCMLOC_1753.23283e-21272 - 3289856 / 57plus None
JLOC1JLOC1_1067.318814e-231798 - 18579859 / 60plus
JLOC1JLOC1_1067.13464e-23263 - 3229859 / 60plus
Harvest21ABC349376443e-25528 - 58710060 / 60plus
Harvest35U35_233217523e-25528 - 58710060 / 60plus



Contig Sequence (752 bp)

>U35_23321 752 Hv_44K_v2
GGCCGCCCCCTGCCTGTTCCCGTGCTTCATCCCCGCCGCCGGCGCCCCCGACCCTAAGCC
CCGGCGACCCCGGCTCCGTGCCCCCGCGCCCTGACCTAGCCCCCGACATCCCACGCCCCG
GCGACCCCCGCCTCGCCGCCGCACCCCCGTAGACCATAGCACAGCCCCCACGCCCCCGCA
CCTCCTCGCCCCGGCGCCGCCAGCCTCCTCGCGTGTCACCCTCGGCACCTCCGCCCTCCT
TGCAGCGCTGACCCTAAGCATGTGGAGGCGGTGCAGCTGCACAGGGCCCCCAATCGTTAA
GGGCCCCGACTCAGGAGCAAGTTCTTGATAGACAGGACACACTTGAGGAACACCGTCTCC
TTGATGCTGTTAAAAGAGTGTCTTTGCAACATGCAGATCTTAGATGGACCTCTGAATTTC
CCAGGAGCTACAGAGCATTTAAGAAGCTTATTAAGAAGGTAAAGAGATGGAAGAGGCATG
GCAGGTGGAAGTGGAATATCATAGCATCAACTAGCAGGCGGCAATGACAAGAGCATATTG
TGTGGAGGAAGAGATGAGAAGAATCTTGTGCTTCTCATCCAATCTTTGTGGAACTCTCTT
TATGTGCGATTGTGCACTTGTTGGGTCCTTTTTCTCTGCACTTGTTAGGTGTTGAACCTT
AATGCGTGGAGTCGATGGATGATGTATTATATTTGATGTGATATGCTATTGAAATGAAAT
ATACATTTTATTTGCAAAAAAAAAAAAAAAAA



Homology of Contig U35_23321 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None