- Probe ABC00541
- Source Contig ABC00541
Affymetrix Source Sequence (996 bp)
>ABC00541 996 GGTGGGCTTCTCCTCCCCTTCCGGTTCGGGTTCCTGGTTCGGTTCGGGTTCGGTTCGGTT CGGGTCCGAGAGACAGTAGCTAGCCTAGCCTAGGGTTTTCGTAGGAGGAGAAGGAGAGGA GGAGATCCATGGCGGAGACGGAGTACCGCTGCTTCGTGGGCGGCCTCGCCTGGGCCACCG ACGACCACAACCTCCAGGCCGCCTTCAGCCAGTACGGCGAGATCCTCGACGCCAAGATCA TCAACGACCGTGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCGGGAGCGAGG AGTCGATGCGCCAGGCCATCGAGGAGATGAACGGCAAGGAGCTCGACGGGCGCAGCATCA CTCCTGCCCGCCGCCGCCCCCGCCGCCTCTACCTCGCCGCTCCCGCCGCCGCACCGCCTC CGTCAGCCATGGCGCCGAAGAAGGAGAAGGCCCCGGCGGCGTCGTCCAAGCCGGCCAAGT CCGGCGGCGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGA ACAACGCGGTGCTCTTCGACCAGGCCACCTACGACAAGCTGCTCACCGAGGTGCCCAAGT ACAAGCAGATCACGCCATCCGTCCTCTCCGAGCGACTCAGGATCAACGGGTCTCTGGCTC GCAGGGCTATCAAGGACCTGATGGAGAGGGGGCTCATCAGGATGGTGTCAATCCACTCCA GCCAGCAGATCTTCACCAGGGCCACAAACACCTGATTTACCTCCTGTGTTACCTGCCTGT TTTCTAGTCCAGTAGACTGAGATGTTGCTGTTATATTGACGTTCATTATGTTCAGCGAGG CACTTTGGCACTTGTGCCACAAGAATGTTGAATTGCTTTGAGTTTTTGGTACAATCTAAG ACGCAGTGAAATCTACCTTATATTAAAAAAAAAAAAAAAAATGTTGCTGTCCCTGTTTGC GTTTTTCTTAAGCTATATGAATGTTCCATCTGATCG
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK355851 | 684 | 0.0 | 58 - 682 | 98 | 613 / 625 | CUST_41524_PI390587928 | ABC00541 ABC35287 ABC39392 |
| MLOC_13086.1 | 634 | 0.0 | 3 - 515 | 90 | 472 / 522 | None | ABC00541 ABC35287 ABC39392 |
| MLOC_59695.1 | 507 | 0.0 | 22 - 382 | 99 | 360 / 361 | CUST_39493_PI390587928 CUST_39528_PI390587928 | ABC00064 ABC00328 ABC00471 ABC00541 ABC17116 ABC53030 |
| MLOC_76432.1 | 1320 | 1e-167 | 97 - 452 | 97 | 344 / 356 | CUST_41524_PI390587928 | ABC00541 ABC35287 |
| MLOC_76432.2 | 935 | 1e-167 | 49 - 404 | 97 | 344 / 356 | CUST_41524_PI390587928 | ABC00541 ABC35287 |
| AK354142 | 908 | 7e-145 | 2 - 288 | 99 | 287 / 290 | CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_39493_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_39528_PI390587928 CUST_40094_PI390587928 | ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030 |
| MLOC_76432.3 | 358 | 3e-138 | 1 - 267 | 100 | 267 / 267 | None | ABC00541 ABC35287 |
| MLOC_13084.1 | 286 | 6e-121 | 4 - 239 | 100 | 236 / 236 | None | ABC00541 |
| MLOC_67354.1 | 470 | 5e-62 | 158 - 410 | 84 | 212 / 253 | None | ABC00541 |
| AK373804 | 4193 | 1e-52 | 3476 - 3696 | 84 | 185 / 221 | CUST_11729_PI390587928 CUST_35182_PI390587928 CUST_11719_PI390587928 CUST_39509_PI390587928 | ABC00064 ABC00146 ABC00541 ABC00668 ABC36822 ABC39327 ABC53030 |
| AK375907 | 709 | 1e-52 | 111 - 331 | 84 | 185 / 221 | CUST_35182_PI390587928 CUST_39509_PI390587928 | ABC00064 ABC00146 ABC00541 ABC00668 ABC36822 ABC39327 ABC53030 |
| AK363553 | 2844 | 1e-52 | 510 - 730 | 84 | 185 / 221 | CUST_35182_PI390587928 CUST_6349_PI390587928 CUST_39509_PI390587928 | ABC00064 ABC00146 ABC00541 ABC00668 ABC08988 ABC36822 ABC39327 ABC53030 |
| AK357068 | 3933 | 1e-52 | 111 - 331 | 84 | 185 / 221 | CUST_3178_PI390587928 CUST_39530_PI390587928 CUST_30112_PI390587928 CUST_35182_PI390587928 CUST_8718_PI390587928 CUST_20789_PI390587928 CUST_39509_PI390587928 CUST_20123_PI390587928 | ABC00064 ABC00146 ABC00541 ABC00668 ABC18698 ABC36822 ABC39327 ABC53030 |
| AK373421 | 854 | 1e-52 | 111 - 331 | 84 | 185 / 221 | CUST_35182_PI390587928 CUST_39509_PI390587928 | ABC00064 ABC00146 ABC00541 ABC00668 ABC36822 ABC39327 ABC53030 |
| MLOC_17819.1 | 629 | 1e-52 | 3 - 223 | 84 | 185 / 221 | None | ABC00541 ABC53030 |