barSeed - Barley Seed Development Database

Probe ABC00360

Source Contig ABC00360

barSeed

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Affymetrix Source Sequence (205 bp)

>ABC00360 205
GACCCCGTCTCATCGCCCAGTTATCCATCCATCTATCGTCTACCGTCTTCGTCAGCAAGT
TATCTATCTTCGGTGTGTCAGTCTGAGTCGTGTTTGTGTGTCTGTCCGGTCCTGTGGTGT
TTTTGATCGCGAGCTCGAGTGGTCTCTGTGTTACGCGAGGAAGAAACAACATGTCTTATC
TTTCAGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62076.1	1599	5e-95	1374 - 1561	100	188 / 188	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
MLOC_62076.2	1680	5e-95	1455 - 1642	100	188 / 188	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
AK354142	908	2e-89	590 - 781	98	188 / 192	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_39493_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_39528_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030
AK368716	459	2e-89	140 - 331	98	188 / 192	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC37166 ABC46573 ABC53030