barSeed - Barley Seed Development Database

Probe ABC46573

Source Contig ABC46573

barSeed

Links

Affymetrix Source Sequence (282 bp)

>ABC46573 282
TCAGCAAGTTATCTATCTTCGGTGTGTCAGTCTGAGTCGGGTTTGTGTGTCTGTCCGGTC
CTGTGGTGTTTTTGATCGCGAGCTCGAGTGGTCTCTGTGTTACGCGAGGAAGAACCAACA
TGTTTTATTTTTCCCCCCCCCCGTCTGTTGTCGGTGATGCAGCAATCCCTCTTCCTGTCT
TGGACTGTAATTGGGATGTGATGTTGGTGATCCTATGTTTGAACTCGGTTTGAATCGATG
AAGAAAAATGCAAGTCATAGCTGCGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62076.1	1599	2e-120	1241 - 1510	96	258 / 270	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
MLOC_62076.2	1680	2e-120	1322 - 1591	96	258 / 270	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
AK368716	459	1e-117	195 - 459	95	253 / 265	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC37166 ABC46573 ABC53030
AK354142	908	4e-117	645 - 908	95	252 / 264	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_39493_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_39528_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030