barSeed - Barley Seed Development Database

Probe ABC00471

Source Contig ABC00471

barSeed

Links

Affymetrix Source Sequence (532 bp)

>ABC00471 532
CCGGTTCGGGTTCCTGGTTCGGTTCGGGTTCGGTTCGGTTCGGGTCCGAGAGACAGTAGC
TAGCCTAGCCTAGGGTTTTCGTAGGAGGAGAAGGAGAGGAGGAGATCCATGGCGGAGACG
GAGTACCGCTGCTTCGTGGGCGGCCTCGCCTGGGCCACCGACGACCACAACCTCCAGGCC
GCCTTCAGCCAGTACGGCGAGATCCTCGACGCCAAGATCATCGCCCAGTTATCCATCCAT
CTATCGTCTACCGTCTTCGTCAGCAAGTTATCTATCTTCGGTGTGTCAGTCTGAGTCGTG
TTTGTGTGTCTGTCCGGTCCTGTGGTGTTTTTGATCGCGAGCTCGAGTGGTCTCTGTGTT
ACGCGAGGAAGAAACAACATGTCTTATCTTTCAGTCGGTCGGTCTGTCGTCGGTGATGCA
GCAATCCCTCTTCCTGTCTTGGACTGTAATTGGGATGTGATGTTGGTGATCCTATGTTTG
AACTCGGTTTGAATCGATGAAGAAAAATGCAAGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62076.1	1599	3e-156	1254 - 1552	100	299 / 299	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
MLOC_62076.2	1680	3e-156	1335 - 1633	100	299 / 299	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_22281_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
AK354142	908	6e-79	2 - 169	98	168 / 171	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_39493_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_39528_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030
AK368716	459	1e-150	149 - 451	99	299 / 303	CUST_35158_PI390587928 CUST_39475_PI390587928 CUST_20127_PI390587928 CUST_35179_PI390587928 CUST_40094_PI390587928	ABC00064 ABC00360 ABC00471 ABC37166 ABC46573 ABC53030
MLOC_59695.1	507	2e-113	141 - 362	100	222 / 222	CUST_39493_PI390587928 CUST_39528_PI390587928	ABC00064 ABC00328 ABC00471 ABC00541 ABC17116 ABC53030