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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39486_PI390587928Hv_44K_v2TTGATGTACCTTGTGTTGTGATGGAAGGAATTCAGAAATCTCGTTTGAGTTCCCAAAAAA655GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK248367.17372e-24665 - 72410060 / 60plus ABC00016 ABC00028 ABC00054 ABC00076 ABC00085 ABC00096 ABC00118 ABC00137 ABC00145 ABC00158 ABC00167 ABC00188 ABC00286 ABC00350 ABC00412 ABC00414 ABC00440 ABC00443 ABC00494 ABC00571 ABC00648 ABC00656 ABC00671 ABC00709 ABC00869 ABC17259 ABC31767 ABC39313
MLOCMLOC_15497.17857e-23444 - 50010057 / 57minus ABC00076 ABC00188 ABC00412 ABC31767 ABC39313
JLOC1JLOC1_10633.17114e-23370 - 42610057 / 57minus
Harvest21ABC004127303e-25656 - 71510060 / 60plusABC00412
Harvest35U35_139397273e-25656 - 71510060 / 60plus
Harvest35U35_139247606e-2212 - 689856 / 57plus



Contig Sequence (727 bp)

>U35_13939 727 Hv_44K_v2
GGCTCAGTCTGGCTCTCTCCATCTCCATCCCAATCCCGACCTACCGCCCGCTCCCGCAGC
AAGGCATGGACGCCTCCGGCACCGTCGCGAAGGGCAAGAAGGGCGCCGCCGGGCGCAAGG
CCGGCAGCCCCAGGAAGAAGTCGGTGTCCCGCTCGGTCAAGGCCGGCCTCCAGTTCCCCG
TCGGCCGCATCGGGCGGTACCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCACGGGCG
CCCCCGTCTACCTCGCGGCCGTCCTCGAGTACCTGGCCGCCGAGCTGCTTGAGCTCGCCG
GGAACGCCGCCAAGGACAACAAGAAGAGCCGCATCATCCCCCGCCACCTGTTGCTCGCCG
TCAGGAACGACGAGGAGCTCGGCAAGCTGCTGGCCGGCGTCACCATCGCGCACGGCGGCG
TGGTCCCCAACATCAACACGGTGCTGCTCCCCAAGAGGACCGCGGAGAAGGAGGGCAAGG
CGCCAAAGTCCCCCAAGAAGGCGCCCAAGTCCCCCAAGAAGGCCGCCAAGTCGCCCAAGA
AGGCCGCCACCCCGAAGAAGGCCTGATGGAGATGCGTTCTGTGTCGTTTAGGCTGTGTGC
TGCGTAGTGTTCTTCTTCTGAATCTGAATAGGGGTGTGAAGTCGTTCGTTAGTTGTTGAT
GTACCTTGTGTTGTGATGGAAGGAATTCAGAAATCTCGTTTGAGTTCCCAAAAAAAAAAA
AAAAAAA



Homology of Contig U35_13939 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None