- Probe CUST_19173_PI390587928
- Source Contig U35_10045
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_19173_PI390587928 | Hv_44K_v2 | TGTGAGAGATGTGCAGGAAGCTTGTGTGCATGATGGATATGTTCTCCACCATAACTGTAC | 487 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK250044.1 | 1508 | 2e-24 | 872 - 931 | 100 | 60 / 60 | plus | ABC01481 ABC01962 ABC01965 ABC01966 ABC01968 ABC01971 ABC01972 ABC01977 ABC02389 ABC12720 ABC32938 ABC34124 ABC41020 ABC43517 |
| MLOC | MLOC_30055.1 | 178 | 7e-23 | 95 - 154 | 98 | 59 / 60 | minus | ABC01962 ABC01972 |
| MLOC | MLOC_29022.1 | 391 | 7e-23 | 266 - 325 | 98 | 59 / 60 | plus | ABC01962 ABC01972 |
| JLOC1 | JLOC1_19925.1 | 156 | 4e-23 | 23 - 82 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_19373.1 | 169 | 4e-23 | 50 - 109 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC01972 | 1173 | 3e-25 | 488 - 547 | 100 | 60 / 60 | plus | ABC01972 |
| Harvest35 | U35_10045 | 725 | 3e-25 | 488 - 547 | 100 | 60 / 60 | plus |
Contig Sequence (725 bp)
>U35_10045 725 Hv_44K_v2 GCTCTGCCCCCTCGCCCCCGAGATCCCATCCAAAACCAGCTGCCGGCGACCTCGCCTCAC CAACCCCGTCGGCGACCTCGCCTCCCCCATCACCGGCCTCAGATCCACCTGAGCAACTTA GCCCTTGGCCAGATTCGTAGCCCACGGCGTCACGGAGCTCCTTCTACACACCAAGCACCG GCAGAGGAGTCCTGTCCTCCTCCCACAGCTACCGCGCCCTCCTCCTCCTTCCACTCCCTA GCCGCGTGCCGCGTCCAACCTTCACAGCTCAGCTCTCCCTCCCTCCTCGCCTCCGAAACC CTAGCCCGCGGGCTGCCATGGCGACCGAGCTCAGGACCCGAGCAACATAGACAAGGTTTG CTCCCATTTGGTCCGATGAAGGAGCCCATGGAGAAGCTGCTGCTGGGAGAGGAGGGCGAC GACGCAGTTCAGTTCCGTTTGGCTGCTCCGACCATGCTAGTGCCTTGCTGACGCCATGGA AGGCTGCTGTGAGAGATGTGCAGGAAGCTTGTGTGCATGATGGATATGTTCTCCACCATA ACTGTACGCCAAGGTGCACCACTGTGTTTCTTGTGCCATCCATGCCCACATTGTCGGTGT CCACTCCCGTGAGAACAGGAGGAACCGTGAGCATCTGCAGCGTTTCTGGCGCANGTTTTG AAAACGGCTGCTGGCTGGTCTATCTTCTGCCCATTGACNAAGCTCTCCAATCTGGTGAGG ATTGA
Homology of Contig U35_10045 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |