barSeed - Barley Seed Development Database

Probe ABC50221

Source Contig ABC50221

barSeed

Links

Affymetrix Source Sequence (408 bp)

>ABC50221 408
ACTACACCAACCTCCTGTCCCAAAAGGGGCTCCTGCACTCGGACCAGGTGCTCTTCAACA
ACGACACCACCGACAACACCGTCCGGAACTTCGCATCCAGCGCGGCGGCCTTCACCAGCG
CCTTCACGACGGCCATGATCAAGATGGGCAACATCGCGCCGCTTACTGGGACGCAGGGCC
AGATCAGGCTCAGCTGCTCCAAGGTGAACTCGTGATTGACGCACGAGCTACAATCCGGCA
GCTCTCCAGCATCACATGTCAATGAATAAGGCCCAAGAACAGGGTCAATACAAATCAGTA
TCTACCAGCACTTGAAACGTGTATTTAAGTACGTGCACCAGCAAAGCATGCGTGCATCTA
CACATGTAACGGTCGAATTATCAATTTACCCATGCAAAGGTCAAGGGG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361868	2749	0.0	2282 - 2688	97	398 / 409	CUST_376_PI415269222 CUST_16880_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC19066 ABC45487 ABC50221
MLOC_65225.3	945	0.0	384 - 790	97	398 / 409	CUST_3805_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_65225.2	1290	0.0	848 - 1254	97	398 / 409	None	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC18641 ABC45487 ABC50221
MLOC_55663.1	1360	5e-93	884 - 1286	83	345 / 417	CUST_3803_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_65226.3	1202	1e-88	815 - 1045	92	213 / 231	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_39127.1	1362	5e-78	824 - 1035	92	194 / 212	CUST_3834_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC39292 ABC45487 ABC50221
MLOC_74605.1	1253	2e-58	791 - 1003	86	183 / 213	CUST_37802_PI390587928 CUST_15503_PI390587928	ABC02112 ABC02113 ABC02115 ABC02119 ABC02123 ABC18641 ABC50221