barSeed - Barley Seed Development Database

Probe ABC02119

Source Contig ABC02119

barSeed

Links

Affymetrix Source Sequence (1039 bp)

>ABC02119 1039
CACCACCACTCCACACCAGTAAGAGGTGCAGGTAGCTTGTACTAAGGCGTAGCTTTGCTC
TTGTAGCTAACTAGCTAGCTAACCATGGCCGCCTCTGTCTCTTGCCTTTCTCTGGTGGTG
CTCGTGGCTCTGGCTACGGTGGCGTCGGCGCAGTTGTCGCCGACGTTCTACGACACGTCC
TGCCCCAGGGCCCTGGCCACCATCAAGAGCGGCGTCATGGCCGCCGTGAGCAGTGACCCT
CGGATGGGCGCGTCGCTGCTCCGGCTTCACTTCCACGACTGCTTCGTTCAAGGCTGTGAC
GCGTCTGTTCTGCTGTCTGGCATGGAACAAAACGCGGCTCCGAACAACGGGTCGCTGAGG
GGATTCGAAGTCATCGACAGCATCAAGGCGCAGCTCGAGGGTATATGCAAGCAGACCGTC
TCCTGCGCCGACATCCTCACTGTCGCCTCCCGTGACTCCGTCGTCGCCCTCGGAGGACCG
TCATGGACAGTCCCTCTCGGGAGAAGAGATTCCATAGATGCAAACGAGGCGGCGGCGAAC
CTGGACCTCCCAGGCTTTACATCTAGCCGGTCAGAACTTGAGATTGCTTTCAAGAACAAG
GGGCTCGACACGGTCGACATGGTAGCCCTCTCGGGCGCGCACACCATCGGCCAGGCGCAG
TGCGGGACCTTCAAGGACAGGATCTACAACGAGGCTAACATCGACACCACCTTCGCCACA
ACTCTCCGGGCCAACTGCCCCCGGTCCGGCGGCGACGGCAGCCTGGCGAACCTCGACACG
ACGACGGCCAACACGTTCGACAACGCCTACTACACCAACCTCATGTCCCAGAAGGGGCTC
CTGCACTCGGACCAGGTGCTGTTCAACAACGACACCACCGACAACACCGTCCGGAACTTT
GCGTCCAACCCGGCGGCGTTCAGCAGCGCCTTCACGACGGCCATGATCAAGATGGGCAAC
ATCGCGCCCAAGACGGGGACGCAGGGCCAGATCAGGATCAGCTGCTCCAGGGTGAACTCG
TGATCGACGGACGAGCTAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65226.3	1202	0.0	7 - 1045	99	1036 / 1039	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_55663.1	1360	0.0	119 - 1112	87	871 / 1000	CUST_3803_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
AK361868	2749	0.0	1524 - 2512	84	835 / 993	CUST_376_PI415269222 CUST_16880_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC19066 ABC45487 ABC50221
MLOC_39127.1	1362	0.0	74 - 1035	84	805 / 963	CUST_3834_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC39292 ABC45487 ABC50221
MLOC_65225.2	1290	2e-170	115 - 1078	78	763 / 972	None	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC18641 ABC45487 ABC50221
AK355507	1268	3e-159	81 - 994	78	723 / 924	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC18641
MLOC_79176.1	1204	8e-155	211 - 1098	78	704 / 899	CUST_3830_PI390587928	ABC02112 ABC02113 ABC02115 ABC02118 ABC02119 ABC18641
MLOC_74605.1	1253	8e-155	58 - 1007	78	744 / 959	CUST_37802_PI390587928 CUST_15503_PI390587928	ABC02112 ABC02113 ABC02115 ABC02119 ABC02123 ABC18641 ABC50221
MLOC_65226.1	445	2e-130	52 - 444	88	347 / 393	CUST_376_PI415269222	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119
MLOC_65226.2	432	5e-127	52 - 432	88	337 / 381	CUST_376_PI415269222	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119
MLOC_65225.3	945	3e-124	38 - 614	81	471 / 581	CUST_3805_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
AK360063	1417	2e-96	81 - 434	85	303 / 357	CUST_3833_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC18641