barSeed - Barley Seed Development Database

Probe ABC02123

Source Contig ABC02123

barSeed

Links

Affymetrix Source Sequence (631 bp)

>ABC02123 631
CTCGACACGGTCGACATGGTAGCCCTCTCGGGCGCGCACACCATCGGCCAGGCGCAGTGC
GGGACCTTCAAGGACAGGATCTACAACGAGGCTAACATCGACACCACCTTCGCCACAACT
CTCCGGGCCAACTGCCCCCGGTCCGGCGGCGACGGCAGCCTGGCGAACCTCGACACGACG
ACGGCCAACACGTTCGACAACGCCTACTACACCAACCTCATGTCCCAGAAGGGGCTCCTG
CACTCGGACCAGGTGCTGTTCAACAACGACACCACCGACAACACCGTCCGGAACTTTGCG
TCCAACCCGGCGGCGTTCAGCAGCGCCTTCACGACGGCCATGATCAAGATGGGCAACATC
GCGCCCAAGACGGGGACGCAGGGCCAGATCAGGATCAGCTGCTCCAGGGTGAACTCGTGA
TCGACGGACGAGCTACTACCTACTAGTCGGCAGGGCTCGCAAGCACGACAAGTACGTGAA
TGAATAAGGCCCCAGCTGAACCTGTGGCCAATATAGGGTATGTTTGGATCTAAGGCAAGA
ACTAAACTAGCCTTGCTAAGCATGGTTGGGCGTTTGGTAAAGGTAAAAATATCTAGCTTT
TGATGGCAATTAAGCATGTAACCGTTGTCAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65226.3	1202	0.0	610 - 1198	99	582 / 589	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_55663.1	1360	1e-166	670 - 1164	88	443 / 501	CUST_3803_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
AK361868	2749	8e-123	2068 - 2512	85	379 / 446	CUST_376_PI415269222 CUST_16880_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC19066 ABC45487 ABC50221
MLOC_65225.3	945	8e-123	170 - 614	85	379 / 446	CUST_3805_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_65225.2	1290	8e-123	634 - 1078	85	379 / 446	None	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC18641 ABC45487 ABC50221
MLOC_39127.1	1362	1e-121	611 - 1035	85	363 / 425	CUST_3834_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC39292 ABC45487 ABC50221
MLOC_74605.1	1253	4e-111	598 - 1007	84	346 / 410	CUST_37802_PI390587928 CUST_15503_PI390587928	ABC02112 ABC02113 ABC02115 ABC02119 ABC02123 ABC18641 ABC50221