barSeed - Barley Seed Development Database

Probe ABC02112

Source Contig ABC02112

barSeed

Links

Affymetrix Source Sequence (1289 bp)

>ABC02112 1289
TGCAGGCAGATAACAAAGTGCAGGTAGCACGCATAGCCCTGGACTAGTAGCTAGGTAGCT
AGCTAACCATGGCCATGGGTTCTGCCTCTTGCATTTCTCTGGTGTTGCTCGTGGCTCTGG
CCACGGCGGCGTCGGGGCAACTGTCGTCGACGTTCTACGACACGTCGTGCCCCAGGGCTC
TGGCCACCATCAAGAGCGGCGTGGCGGCCGCCGTGAGCAGCGACCCCCGCATGGGCGCGT
CCCTGCTCAGGCTTCACTTCCACGACTGCTTTGTCCAAGGCTGTGATGCATCTGTCCTGC
TGTCTGGCATGGAACAAAACGCGGGTCCGAACCTGGGGTCGCTGAGGGGCTTCGGCGTCA
TCGACAGCATCAAAACCCAGCTGGAGAGTATATGCAAGCAGACCGTCTCTTGCGCCGACA
TCCTCACCGTCGCCGCCCGGGACTCCGTCGTCGCCCTTGGAGGGCCGTCGTGGACTGTCC
CGCTGGGGAGACGGGACTCCACCACCGCAAGCGCGGCGCTGGCAAACAGCGACCTCCCTG
GCCCTGGCTCCAGCCGGTCGCAGCTCGAGGCCGCGTTCCTCAAGAAGAACCTCAACACGG
TCGACATGGTCGCGCTCTCTGGCGCGCACACCATCGGCAAGGCCCGCTGCTCCACCTTCC
GGACTCGGATCTACGGCGGCGACACCAACATCAACGCCGCCTTCGCGACGTCGCTCAAGG
CCAACTGCCCACAGACAACCGGCTCCGGCGACGGCAACCTAGCGAACCTCGACACGACCA
CGCCCAACGGGTTCGACAACGCCTACTACACCAACCTCCTGTCCCAAAAGGGGCTCCTGC
ACTCGGACCAGGTGCTCTTCAACAACGACACCACCGACAACACGGTAAGGAACTTCGCGT
CCAGCGCGGCGGCCTTCAGCAGCGCCTTCACGACGGCCATGATCAAGATGGGAAACATCG
CGCCGCTCACCGGGACGCAGGGCCAGATCAGGCTCAGCTGCTCCAAGGTGAACTCGTGAT
TGACGCACGAGCTACAATCCGGCAGCTCTCCAGCATCACATGTCAATGAATAAGGCCCAA
GAACAGTGGTCAATACAAATCAGTATCTACCAGCACTTGAAACGTGTATTTAAGTACGTG
CACCAGCAAAGCATGCGTGCATCTACACATGTAACGGTCGAATTATCAATTTCCCATGCA
AAGGCAAGGGGAAATTACCATCAAGCCTACTTACACTTGTACATGGAATGAAGAGGTGCT
CTTCTCTCTGTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361868	2749	0.0	1480 - 2749	99	1268 / 1270	CUST_376_PI415269222 CUST_16880_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC19066 ABC45487 ABC50221
MLOC_65225.2	1290	0.0	399 - 1290	98	876 / 892	None	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC18641 ABC45487 ABC50221
MLOC_65225.3	945	0.0	35 - 854	99	819 / 820	CUST_3805_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_55663.1	1360	0.0	133 - 1348	83	1018 / 1232	CUST_3803_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_39127.1	1362	0.0	75 - 1035	86	832 / 970	CUST_3834_PI390587928	ABC02112 ABC02114 ABC02118 ABC02119 ABC02123 ABC39292 ABC45487 ABC50221
MLOC_65226.3	1202	0.0	69 - 1045	84	834 / 993	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC02123 ABC45487 ABC50221
MLOC_65226.1	445	0.0	8 - 445	99	437 / 438	CUST_376_PI415269222	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119
MLOC_65226.2	432	0.0	8 - 432	99	424 / 425	CUST_376_PI415269222	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119
AK355507	1268	4e-158	81 - 994	78	723 / 926	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC18641
MLOC_79176.1	1204	2e-151	211 - 1124	78	723 / 930	CUST_3830_PI390587928	ABC02112 ABC02113 ABC02115 ABC02118 ABC02119 ABC18641
MLOC_74605.1	1253	9e-51	61 - 266	85	175 / 207	CUST_37802_PI390587928 CUST_15503_PI390587928	ABC02112 ABC02113 ABC02115 ABC02119 ABC02123 ABC18641 ABC50221
MLOC_62622.2	1214	1e-119	381 - 1132	77	589 / 762	None	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC18641
AK360063	1417	1e-94	81 - 434	85	300 / 355	CUST_3833_PI390587928	ABC02112 ABC02113 ABC02114 ABC02115 ABC02118 ABC02119 ABC18641