- Probe ABC41046
- Source Contig ABC41046
Affymetrix Source Sequence (545 bp)
>ABC41046 545 GAGGGTATTCGTGTTGATGCATTATCCATAATGATCCTCATTGTAAGGACTAGTGATTCC AACCGGGAGCGTGAAAAATTTGGATTTATTTCTGTAATGGAAATCTTGCATCAGTTGCTG CAGAAAGAGAATGCATTGCTCGTAAAGAAGCATTCTGTGCATCTACTTTTCTTGCTTTTG AACTGCCCTATGATGTTGAAGATGCTTTGCAGTGGAGGTAAAGATGGTTCTGAACTGATG GAAACTGTTGATGTGAAAATGAACCACAACAAGCTATCAACTCAGTTCTCAAGGACTTGT CTGAATGTTTGACTTGTGAAGCAACAACTTCTCTGGTTGATATGACTACCTACTAATCAG ATGGTTGCGAGTGCATACAAATAAGTATTGATATTGTATGGTTGTTTGCGAGAGTGGCGG ACACTACTTTGATCCTTTGACAGATAGTTCTTCATAATGTGATAGTGTATAGGCCTTTTT CCCTGGGGACCCTACTGCTCAACTACTACACCCTTGGCTGCTATCGACCAAAAAAAAAAA AAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK370466 | 1731 | 0.0 | 1317 - 1731 | 97 | 405 / 416 | CUST_29506_PI390587928 | ABC05490 ABC41046 |
| AK251809.1 | 1353 | 4e-165 | 199 - 535 | 98 | 330 / 337 | CUST_20673_PI390587928 | ABC41046 |
| MLOC_27084.1 | 503 | 2e-148 | 159 - 498 | 95 | 324 / 342 | None | ABC03063 ABC03074 ABC41046 |
| MLOC_46502.1 | 434 | 3e-82 | 251 - 434 | 97 | 178 / 184 | None | ABC41046 |
| MLOC_46502.2 | 434 | 3e-82 | 248 - 431 | 97 | 178 / 184 | None | ABC41046 |
| MLOC_46502.5 | 478 | 3e-82 | 295 - 478 | 97 | 178 / 184 | None | ABC41046 |
| MLOC_46502.6 | 351 | 1e-80 | 171 - 351 | 97 | 175 / 181 | None | ABC41046 |
| MLOC_46361.1 | 1131 | 3e-76 | 837 - 1033 | 93 | 185 / 199 | CUST_8933_PI390587928 | ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |
| MLOC_61163.1 | 246 | 2e-73 | 1 - 162 | 98 | 160 / 164 | CUST_25347_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |
| MLOC_27084.2 | 329 | 6e-64 | 84 - 235 | 96 | 146 / 152 | None | ABC41046 |
| MLOC_62063.1 | 348 | 2e-54 | 209 - 345 | 95 | 132 / 139 | CUST_8922_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |
| MLOC_62063.2 | 182 | 2e-54 | 44 - 180 | 95 | 132 / 139 | CUST_8922_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |
| AK359678 | 1211 | 2e-53 | 1034 - 1171 | 94 | 132 / 140 | CUST_5079_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 ABC49982 |
| MLOC_79668.1 | 281 | 4e-51 | 50 - 186 | 94 | 130 / 139 | CUST_41299_PI390587928 CUST_8933_PI390587928 CUST_8922_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |
| MLOC_52931.1 | 320 | 4e-51 | 106 - 242 | 94 | 130 / 139 | CUST_8920_PI390587928 CUST_8922_PI390587928 CUST_8933_PI390587928 | ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 |