barSeed - Barley Seed Development Database

Probe ABC03070

Source Contig ABC03070

barSeed

Links

Affymetrix Source Sequence (1039 bp)

>ABC03070 1039
GACTTCGAACCAGCAGGAAGAGGCAGGACGGAGGGAGTTCCACCGCGATCGCGAACCAGC
AGGTGAGCCGGCGGCCATGGCACGCCCAGATCCGCCCTCCTTTGGCCGTCGTCGTCGATC
TCCTCTGCGCCTACCGCCGGATCCACCTCAGGTGCACCACCTAGGAGACCATGGCTCCAT
TTGCTTCTTCTGCTGTCCCGGTTCTCCAACCCTAGTGCCTGCCGACGCCATGGAAGTGGA
GCAGATGAGAGAGACCATTTGGTTTGAGGTGACTATTTTTGGCAAGGGAAGCAATGTCAC
AAGAGCAGGGGATGTCCCTCTCGGAGCGGAGCAGTATGCCCACCGCTCCGGTACCTTTTT
GTGCTATGACGAGTGTGTCACTGCTGTCGGCATCAAGATGAGAGAGATTATTTGGTTTGA
GGTGACCTCCCAGGAAGCAAAAAGGGCGTGGCAAGGGAAGGAATGTTACAAGAGAAACGG
ATGGCCCCTCTCGGAGCAGAGCAGAGCAGTATGCCCACCACTCCAGCACCTTTTTCTGCT
ACGAGAAGTCCTTCACCGCTGTCGGCATCAAGCTGCCCCTGGTTCGATTCCTCCCAAGAG
CGGATCTGCGCCAAAGGGCAACTTTTCTTGCTCACGGGATAACGGCCACTGGCTGCTCCA
CAACAACGACAAGCACGACGGCCTTGACGAAGTTGTCCGTCGTCGACACTGAAGAGCAAG
CCCGCCTTCTCCAGACTTGCATGACGGGAGGGGAGCGGGCGGCCACTGCCTCCTTCATGC
TGCCGATACCGAAGAGCAAGCCCGCCTTCTCCAGAGTTTGCAAAGGAGCTTTACGTTCAG
TGGCGGACACTACTTTGATCCTATGATAGATGGTTCTTCATAATGTGATAGTGTATAGGC
CTTCTTCCTGGGGACCTACTGCTCAACGACTGCACTCCTTGGCTGCTACCGACCAAAAAT
TTTACAAATCTGTCTACATGTTTTGTTTCTATATATTTACAAATATCCTATCAATCCATT
TTTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367718	1007	0.0	24 - 708	99	684 / 688	None	ABC03070 ABC49982
MLOC_44827.3	590	0.0	6 - 577	100	572 / 572	None	ABC03070 ABC49982
MLOC_44827.1	587	0.0	6 - 574	99	569 / 572	None	ABC03070 ABC49982
MLOC_44827.2	2214	1e-123	1961 - 2201	100	241 / 241	None	ABC03070 ABC49982
MLOC_32655.1	764	2e-171	48 - 533	90	438 / 486	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
AK371872	1144	5e-167	624 - 1110	90	436 / 487	CUST_8922_PI390587928 CUST_30297_PI390587928 CUST_8920_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
MLOC_31254.1	319	1e-163	1 - 316	99	315 / 316	None	ABC03062 ABC03070 ABC03074
AK359678	1211	3e-154	754 - 1211	89	409 / 458	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 ABC49982
MLOC_44825.1	2186	1e-123	1918 - 2158	100	241 / 241	None	ABC03070 ABC49982
AK361403	1405	2e-135	976 - 1405	88	379 / 430	CUST_8922_PI390587928 CUST_8920_PI390587928 CUST_30297_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
AK363837	4543	1e-133	4121 - 4543	88	374 / 424	CUST_8922_PI390587928 CUST_32915_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK358808	1074	8e-130	653 - 1074	88	371 / 423	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_44825.2	2109	6e-111	1 - 218	100	218 / 218	None	ABC03070 ABC49982
MLOC_44827.4	1572	1e-123	1322 - 1562	100	241 / 241	None	ABC03070
MLOC_77191.1	284	1e-102	1 - 276	92	254 / 277	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_62063.1	348	2e-100	1 - 348	87	303 / 348	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_31850.1	477	2e-100	1 - 367	86	316 / 367	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK376074	1180	5e-92	601 - 809	96	201 / 209	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
MLOC_77842.1	250	2e-90	12 - 250	93	222 / 240	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_78678.1	298	8e-90	1 - 252	91	231 / 254	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_23735.1	514	1e-88	309 - 514	96	197 / 206	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
MLOC_23735.2	508	1e-88	303 - 508	96	197 / 206	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
MLOC_52931.1	320	8e-85	122 - 310	97	183 / 189	CUST_8922_PI390587928 CUST_8933_PI390587928 CUST_8920_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_59230.1	252	1e-82	55 - 242	96	182 / 189	CUST_8920_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_29408.1	323	1e-82	13 - 322	86	267 / 310	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_46361.1	1131	2e-81	914 - 1102	96	181 / 189	CUST_8933_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_27292.1	443	2e-81	61 - 249	96	181 / 189	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_61163.1	246	9e-80	43 - 231	95	180 / 189	CUST_25347_PI390587928	ABC03062 ABC03063 ABC03065 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_29724.1	369	4e-78	69 - 257	95	179 / 189	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK369982	2078	7e-76	1900 - 2078	96	171 / 179	CUST_8933_PI390587928 CUST_8922_PI390587928 CUST_8920_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_79668.1	281	9e-75	1 - 248	89	220 / 248	CUST_41299_PI390587928 CUST_8922_PI390587928 CUST_8933_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_27622.1	287	4e-73	32 - 287	88	224 / 256	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK365517	2421	1e-72	2169 - 2421	88	222 / 253	CUST_8922_PI390587928 CUST_8933_PI390587928 CUST_41299_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK360294	2129	3e-59	1979 - 2127	95	141 / 149	CUST_8920_PI390587928 CUST_8933_PI390587928 CUST_19852_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_1951.1	752	4e-53	235 - 352	99	117 / 118	None	ABC03070 ABC49982
MLOC_7663.1	229	5e-52	115 - 229	99	114 / 115	CUST_8933_PI390587928 CUST_41301_PI390587928	ABC03063 ABC03070 ABC03074 ABC32612
MLOC_62063.2	182	2e-51	60 - 182	97	119 / 123	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_26093.1	142	2e-51	1 - 139	94	130 / 139	None	ABC03070 ABC03074