barSeed - Barley Seed Development Database

Probe ABC03067

Source Contig ABC03067

barSeed

Links

Affymetrix Source Sequence (1427 bp)

>ABC03067 1427
GCTGATATTCAGAGAGTTCCCCTTGAAAAATGCACTGCGCCTGAACCCCAGTGGAAACAC
GAAAGCAACGCCGAGCCTTCAACAAATCATAATGATGATGCTCATGGTGTTTTCTGAGGG
ATTGATCCAAGCCTTGCTGTTCACGCATATGAAGAACCTGTCGAAGGAACAGTCTATGAG
AGAGAAGTCAACAGACTGTTGGACAGCTTGGGCCCTCGGTTTGTAGATTGGTGGTGGAAC
ACGCCATTGCCTGTGGATGCTGATCTCCTTCCAGAAGTTGTTCCAGGATTCAAAACTCCA
TTTAGACAGTGCCCTCCTGGTGTGAGACCAACACTAGCAGATGAGGAGCTGACATACCTG
CGCAAGCTTGCACGTCCTTTGCCAACACATTTTGCTCTAGGATGATTAAGTATTAACTGC
TTCCGGCACCCTTACCTTCTTATGCATACATCACCTTAATGTTCCACACAAAATAATGTA
GAAGCACAAGAAAAGTGGTTCTTCAGATTCCTCGGTCCTCTGCAATTTCTTTGCTACAAA
AAATACGGCAGCTAGGAGGCATTGCCATTATGCATACATTGGTGGCCTGCCTCCATCAAA
CTGAACCTGAGCAACGGGTTTTAGCGGCTAAGCTTTTCCTTCAATTGGATATGCTGCAAC
AACAGATAAAATCAAAAATTGGGCCAAGAGCTGCTGTTGTTGTGAGCGCGCGACAGGAAA
GGAACGATGCCATAGTTGAGCTAAGAGAAAAACAGGGCAAAAAATTGGTGAACGACGCCA
TAGTTATAAAATAAAGAATGCATTCACCTAACCCTTTAAAACATTTTTAAAAGGAGGCTG
CATGATATGAACAAAGGAATTTGGACACATTCATGTAGGTATACTGGTCTGATTATTAAT
TTTATGTTAAATTTTCTCCACGTACTTGTACAGTCAAGCAAGATTGAAGTTCCAATTGGG
CCTCTTCCCTGGGCGCCACTCTCCCTCTGCTCCTTCGACCCAAGTGCCGACAAAATGGAG
CTCGCCAAGGCACACTTCATGGACGAGGAGGACCACCCACGACGATGAACATGTGTGACC
TCACCCCCGAGCCTGACGAGCTCGACAACAACAACATCGTCAACTTTGATCTCGATGACA
AGGTTGATCTCTAGCTTAGTGCCGACACCGAAGAGCAAGCCCGCCTTCTCCAGAGTTTGC
AAAGGAGCTTTACGTTCAGGGCATGGTTGTTTGCACAGAGTGGCGGAAACTACTTTGATC
CTTTGGAAGATAGTTCTTCATAATGTGATAGTGTATAGGCCTTCTTTCTGAGGACCTACT
GCTCAACTACTGCACTCCTTGGCTGCTATCGACCAAAAATTTTACAAATCTGTCTACATG
TTTTGTTTCTATATAAAACAAATATCCTATCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358750	2290	0.0	926 - 2290	99	1355 / 1365	CUST_41299_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
AK365517	2421	0.0	931 - 1348	98	410 / 419	CUST_8933_PI390587928 CUST_8922_PI390587928 CUST_41299_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK364024	2269	8e-176	1656 - 2027	97	360 / 372	CUST_19852_PI390587928	ABC03063 ABC03064 ABC03066 ABC03067 ABC32612
AK369982	2078	0.0	1582 - 2075	96	475 / 494	CUST_8933_PI390587928 CUST_8920_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK359307	2615	4e-104	2153 - 2373	98	216 / 221	CUST_41296_PI390587928 CUST_19852_PI390587928	ABC03063 ABC03064 ABC03066 ABC03067
MLOC_46574.1	860	0.0	195 - 850	97	638 / 656	None	ABC03066 ABC03067
AK249100.1	2998	3e-55	1912 - 2029	100	118 / 118	CUST_19852_PI390587928 CUST_41296_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_35688.4	665	0.0	1 - 665	95	641 / 676	None	ABC03066 ABC03067
MLOC_35688.1	740	0.0	1 - 510	97	494 / 510	None	ABC03066 ABC03067
MLOC_35688.6	708	0.0	1 - 495	97	480 / 495	None	ABC03066 ABC03067
AK360294	2129	7e-82	1483 - 1660	98	174 / 178	CUST_8933_PI390587928 CUST_8920_PI390587928 CUST_8922_PI390587928 CUST_19852_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK364453	2668	2e-126	1977 - 2234	98	254 / 258	CUST_19852_PI390587928 CUST_8922_PI390587928 CUST_8920_PI390587928 CUST_41296_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_46857.1	866	0.0	423 - 837	98	408 / 416	None	ABC03066 ABC03067
AK359038	2363	0.0	764 - 1164	99	396 / 401	CUST_33431_PI390587928	ABC03066 ABC03067
AK359077	1901	0.0	767 - 1167	99	396 / 401	None	ABC03066 ABC03067
MLOC_46574.2	927	2e-53	319 - 436	99	117 / 118	None	ABC03066 ABC03067
MLOC_35688.2	744	1e-104	471 - 744	92	261 / 285	None	ABC03066 ABC03067
MLOC_35688.3	819	0.0	1 - 410	96	397 / 412	None	ABC03066 ABC03067
MLOC_35688.5	580	0.0	4 - 391	97	378 / 388	None	ABC03066 ABC03067
MLOC_30097.1	369	1e-179	1 - 369	98	360 / 369	None	ABC03067
MLOC_49139.1	442	3e-170	79 - 442	96	352 / 365	None	ABC03066 ABC03067
MLOC_30098.1	342	2e-162	1 - 342	97	332 / 342	None	ABC03067
MLOC_27552.1	343	8e-151	1 - 341	95	324 / 341	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_31659.1	358	4e-144	56 - 358	97	295 / 303	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_35260.1	299	1e-139	1 - 299	97	291 / 301	None	ABC03067
MLOC_526.1	269	1e-134	1 - 267	99	266 / 268	None	ABC03066 ABC03067
MLOC_50720.1	537	1e-133	1 - 274	98	269 / 274	None	ABC03066 ABC03067
MLOC_52931.1	320	3e-130	2 - 297	95	282 / 296	CUST_8920_PI390587928 CUST_8933_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_30643.2	297	4e-129	26 - 297	97	265 / 272	None	ABC03066 ABC03067
MLOC_35260.2	342	3e-115	94 - 342	97	243 / 251	None	ABC03067
MLOC_8333.1	245	9e-111	1 - 233	98	228 / 233	None	ABC03066 ABC03067 ABC32612
MLOC_58527.1	255	1e-109	1 - 255	95	242 / 255	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
AK371872	1144	7e-107	844 - 1097	94	240 / 254	CUST_8922_PI390587928 CUST_30297_PI390587928 CUST_8920_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
MLOC_79668.1	281	3e-105	1 - 248	95	235 / 248	CUST_8933_PI390587928 CUST_41299_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_29724.1	369	1e-103	82 - 335	94	238 / 254	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_29408.1	323	7e-102	26 - 279	93	237 / 254	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK359678	1211	3e-100	972 - 1206	95	223 / 235	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 ABC49982
MLOC_32655.1	764	3e-100	61 - 314	93	236 / 254	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
MLOC_30643.1	367	2e-97	159 - 367	98	204 / 209	None	ABC03066 ABC03067
MLOC_27622.1	287	2e-96	32 - 283	92	235 / 255	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_27292.1	443	3e-95	1 - 236	94	221 / 236	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_77620.1	234	1e-94	43 - 234	99	191 / 192	None	ABC03067
AK361403	1405	5e-88	1196 - 1405	95	199 / 210	CUST_8920_PI390587928 CUST_30297_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
MLOC_50638.1	198	5e-88	1 - 198	96	192 / 199	None	ABC03067
MLOC_62063.1	348	7e-87	147 - 348	96	193 / 202	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
AK360668	1519	1e-74	1011 - 1181	97	166 / 172	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03074 ABC32612
AK358808	1074	1e-84	874 - 1074	95	192 / 202	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_46574.3	263	1e-84	1 - 177	99	175 / 177	None	ABC03066 ABC03067
AK363837	4543	2e-83	4339 - 4543	94	193 / 205	CUST_32915_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_27047.1	410	3e-80	233 - 410	97	173 / 178	None	ABC03067
AK369001	3027	4e-79	2437 - 2615	97	173 / 179	None	ABC03067 ABC04541 ABC08039
MLOC_8251.1	280	2e-78	103 - 280	97	172 / 178	None	ABC03066 ABC03067
MLOC_62063.2	182	2e-77	1 - 182	96	174 / 182	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_59230.1	252	9e-76	68 - 252	95	176 / 186	CUST_8922_PI390587928 CUST_8920_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_30099.2	257	9e-76	1 - 170	97	165 / 170	None	ABC03066 ABC03067
MLOC_61163.1	246	4e-74	28 - 218	93	179 / 192	CUST_25347_PI390587928	ABC03062 ABC03063 ABC03065 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_46361.1	1131	2e-72	898 - 1089	93	178 / 192	CUST_8933_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_35313.3	148	7e-72	1 - 148	100	148 / 148	None	ABC03067
MLOC_35326.1	318	4e-69	161 - 318	97	153 / 158	None	ABC03066 ABC03067
MLOC_41290.1	375	4e-64	230 - 375	97	142 / 146	None	ABC03063 ABC03066 ABC03067
MLOC_27223.1	209	4e-64	66 - 208	98	140 / 143	None	ABC03066 ABC03067
MLOC_35313.2	144	2e-63	1 - 144	98	141 / 144	None	ABC03067
MLOC_30099.1	371	2e-62	143 - 285	97	139 / 143	None	ABC03066 ABC03067
MLOC_31850.1	477	2e-57	3 - 145	95	136 / 143	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_21237.2	1090	1e-54	2 - 127	98	123 / 126	None	ABC03067
MLOC_21237.1	1130	1e-54	2 - 127	98	123 / 126	None	ABC03067
MLOC_32733.1	144	6e-53	1 - 138	94	130 / 138	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612