barSeed - Barley Seed Development Database

Probe ABC04541

Source Contig ABC04541

barSeed

Links

Affymetrix Source Sequence (924 bp)

>ABC04541 924
GAGACAAAGTTGCAGCGTCAGCGCGACCTGCCCGTGCCCGCCCCACCTACCGCCGCCGGC
CGCCCAATCGATTGGCAATGTCGCGGCCCGCCGGCAATCCCCCGTACGCCGTCGAGCTCG
GCGCCGCGAAGAAGGCCGTCTCCCTCGCCGCCCGCCTATGCCAGACGGTGCAGCAGGAAA
TCGTGCAGTCAGACATTCAATCTAAGGCGGATAAGACTCCTGTCACCGTAGCTGATTATG
GATCTCAGGTATTGGTGAGTCTTGTGTTAAATATGGAAGTAACCTCTGGTTCCTTTTCTA
TGGTGGCCGAGGAGGATTCAGAAGACTTGAGAAAGGATGGCGCTGACGAAATTCTGGAGC
GCATTACTGATCTCGTAAACAAAACTCTCGCTGAGGATGGTTCATACAACATTTTATTAT
CTAAGGAAGCTATCCTCTCTGCACTTGATACCGGGAAGTCCGAGGGTGGTCCATCTGGCC
GACATTGGGTTCTAGATCCAATTGATGGGACTAAAGGATTCGTGAGAGGAGGCCAATATG
CCATTGCACTGGCACTGCTTGATGAGGGCAAAGTTGTCTTAGGTGTGTTGGGATGTCCAA
ATCTTCCTTTGACATCAATAAGTAACCTCAGTGATAGCTCATCAAGAGATCAAACCGGGG
CCCTCTTTTCAGCTGCAATCGGTTGTGGTGCTGAAGAGCAGTCTTTGGATGGCTCTCCAC
CACAAAAGATTAGTGTTTGTACCATCATTGCTACAAATAAACAGTTGATGCCATCAGTCC
TGAAGTCTGTCCAGGAGGCAATCAAGGAGAAAAAACAGGCCTCTTCTCCATTGTAAAAGG
TTTTTTAACCTTCCCTGTTACTGAAGTTGGATTGGTCCAAAATAATGATCGCTATGCTAC
TCCTTGTTCATTTATTCACACTGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_22863.3	1349	1e-87	1125 - 1307	99	181 / 183	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
AK367269	1415	6e-91	1069 - 1250	100	182 / 182	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_22863.2	649	0.0	66 - 648	99	581 / 583	None	ABC04541 ABC04542
MLOC_22863.4	1259	1e-87	1035 - 1217	99	181 / 183	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
AK249013.1	1557	0.0	214 - 882	89	593 / 670	None	ABC04541 ABC04542 ABC04543
MLOC_22863.1	1441	1e-87	1216 - 1398	99	181 / 183	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_34838.2	1334	8e-80	684 - 911	90	207 / 229	None	ABC04541 ABC04542 ABC04543
MLOC_34838.1	1886	8e-80	678 - 905	90	207 / 229	None	ABC04541 ABC04542 ABC04543
AK369001	3027	2e-70	199 - 355	97	153 / 157	None	ABC03067 ABC04541 ABC08039