barSeed - Barley Seed Development Database

Probe ABC04543

Source Contig ABC04543

barSeed

Links

Affymetrix Source Sequence (743 bp)

>ABC04543 743
TATGCCATTGCACTGGCACTGCTTGATGAGGGCAAAGTTGTCTTAGGTGTGTTGGGATGT
CCAAATCTTCCTTTGACATCAATAAGTAACCTCAGTGATAGCTCATCAAGAGATCAAACC
GGGGCCCTCTTTTCAGCTGCAATCGGTTGTGGTGCTGAAGAGCAGTCTTTGGATGGCTCT
CCACCACAAAAGATTAGTGTTTGTACCATCGACAATCCAGTCAATGCCTCGTTCTTTGAA
TCCTATGAAGGAGCACACACGATGCGTGATTTTACTGGCTCCGTAGCGGAGAAACTTGGT
GTCCAAGCTCCTCCAGTCAGAATAGATAGCCAAGCAAAATATGGTGCTCTGGCCCGTGGA
GATGGTGCCATTTACTGGCGTTTCCCACACGAGGGTTACAGGGAAACAATATGGGATCAT
GCAGCTGGCTCAATTGTCGTCACGGAAGCTGGAGGTGTAGTTAAAGATGCCTCAGGAAAC
GATCTCGATTTCTCGAAAGGAAGATTTCTTGATCGTGACACAGGCATCATTGCTACAAAT
AAACAGTTGATGCCATCAGTCCTGAAGTCTGTCCAGGAGGCAATCAAGGAGAAAAAACAG
GCCTCTTCTCCATTGTAAAAGGTTTTTTAACCTTCCCTGTTACTGAAGTTGGATTGGTCC
AAAATAATGATCGCTATGCTACTCCTTGTTCATTTATTCACACTGTTTATGTGTAAGTGA
CCTTTGTGGAAAAAAATACAACC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367269	1415	0.0	545 - 1289	99	743 / 745	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_22863.1	1441	0.0	692 - 1436	98	732 / 745	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_22863.3	1349	0.0	601 - 1345	98	732 / 745	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_22863.4	1259	0.0	645 - 1255	98	599 / 611	CUST_4658_PI390587928	ABC04541 ABC04542 ABC04543
MLOC_34838.1	1886	0.0	169 - 887	89	650 / 732	None	ABC04541 ABC04542 ABC04543
AK249013.1	1557	0.0	673 - 1391	89	649 / 732	None	ABC04541 ABC04542 ABC04543
MLOC_34838.2	1334	1e-106	603 - 893	91	265 / 292	None	ABC04541 ABC04542 ABC04543