barSeed - Barley Seed Development Database

Probe ABC03062

Source Contig ABC03062

barSeed

Links

Affymetrix Source Sequence (410 bp)

>ABC03062 410
GGATCTGCGCCAAAGGGCAAGGGGGCTTGCTCACGCGGATAACGGTCACTGGCTGCTCCA
CAACAACGACAAGCACGACGGCCTTGACGAAGTTGTCTGCCGCCGACACCGAAGAGCAAG
CCCGCCTTCTCCAGACTTGCATGACGGGAGGGGAGGGGGCGACCACTGCCTCCTTCACAC
ACCAAGCCGCCGACACCGAAGAGCAAGCCCGCCTTCTCCAAAGTTTGCAAAGAAGCTTTA
CGTTCAGGGCATGGTTGTTTGTAGAGAGTGGCGGACACTACTTTGATCCTTTGACATATA
GTTCTTCATAATGTGATAGTGTATAGGCCTTCTTTCTGGGGACCTACTGCTCAACTACTG
CACTCCTTGGCTGCTATCGATCAAAAAATTTACAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361403	1405	0.0	1008 - 1403	99	391 / 396	CUST_8920_PI390587928 CUST_8922_PI390587928 CUST_30297_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
AK371872	1144	0.0	656 - 1051	99	391 / 396	CUST_8922_PI390587928 CUST_8920_PI390587928 CUST_30297_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
MLOC_32655.1	764	3e-180	107 - 502	95	378 / 396	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC49982
AK359678	1211	6e-177	784 - 1179	95	376 / 396	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046 ABC49982
AK363837	4543	1e-168	4151 - 4543	94	369 / 393	CUST_32915_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK358808	1074	5e-158	683 - 1074	92	364 / 394	CUST_5079_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_62063.1	348	6e-157	1 - 348	95	333 / 349	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
AK360668	1519	5e-153	1182 - 1519	96	323 / 338	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_31850.1	477	2e-132	3 - 336	92	309 / 335	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_78678.1	298	1e-128	5 - 298	95	280 / 295	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_77842.1	250	5e-113	1 - 236	98	231 / 236	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_77191.1	284	1e-108	27 - 284	94	243 / 258	None	ABC03062 ABC03063 ABC03070 ABC03074
MLOC_79668.1	281	4e-104	41 - 281	95	229 / 241	CUST_8933_PI390587928 CUST_41299_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_29724.1	369	2e-101	128 - 369	94	228 / 242	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_29408.1	323	2e-101	72 - 322	93	234 / 251	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_27622.1	287	2e-91	6 - 237	93	217 / 234	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_31254.1	319	1e-88	16 - 319	86	286 / 333	None	ABC03062 ABC03070 ABC03074
AK365517	2421	2e-87	2170 - 2377	95	197 / 208	CUST_8922_PI390587928 CUST_8933_PI390587928 CUST_41299_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_27292.1	443	2e-87	1 - 190	97	185 / 190	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK358750	2290	9e-86	2086 - 2290	95	194 / 205	CUST_41299_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_52931.1	320	9e-86	44 - 251	94	196 / 208	CUST_8920_PI390587928 CUST_8922_PI390587928 CUST_8933_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
AK360294	2129	1e-84	1900 - 2108	94	197 / 210	CUST_8920_PI390587928 CUST_19852_PI390587928 CUST_8922_PI390587928 CUST_8933_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
AK369982	2078	1e-84	1821 - 2029	94	197 / 210	CUST_8922_PI390587928 CUST_8920_PI390587928 CUST_8933_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_27552.1	343	2e-82	131 - 338	93	194 / 208	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
AK364453	2668	3e-80	2474 - 2666	95	183 / 193	CUST_41296_PI390587928 CUST_19852_PI390587928 CUST_8920_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_58527.1	255	5e-78	1 - 185	95	176 / 185	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_62063.2	182	7e-77	1 - 180	96	172 / 180	CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_31659.1	358	2e-72	189 - 358	96	163 / 170	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
AK376074	1180	7e-72	633 - 815	93	171 / 183	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
MLOC_23735.1	514	7e-72	303 - 485	93	171 / 183	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
MLOC_23735.2	508	7e-72	297 - 479	93	171 / 183	None	ABC03062 ABC03063 ABC03070 ABC03074 ABC49982
AK249100.1	2998	3e-65	2834 - 2996	94	154 / 163	CUST_41296_PI390587928 CUST_19852_PI390587928	ABC03062 ABC03063 ABC03064 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_32733.1	144	7e-62	1 - 144	97	139 / 144	None	ABC03062 ABC03063 ABC03066 ABC03067 ABC03074 ABC32612
MLOC_61163.1	246	9e-56	28 - 172	94	137 / 146	CUST_25347_PI390587928	ABC03062 ABC03063 ABC03065 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046
MLOC_59230.1	252	9e-56	114 - 252	95	133 / 140	CUST_8920_PI390587928 CUST_8922_PI390587928	ABC03062 ABC03063 ABC03065 ABC03066 ABC03067 ABC03070 ABC03074 ABC32612
MLOC_46361.1	1131	3e-51	898 - 1043	92	134 / 146	CUST_8933_PI390587928	ABC03062 ABC03063 ABC03067 ABC03070 ABC03074 ABC32612 ABC41046