barSeed - Barley Seed Development Database

Probe ABC31513

Source Contig ABC31513

barSeed

Links

Affymetrix Source Sequence (455 bp)

>ABC31513 455
GCAACGTGCTCATCGTCAGCGGCGAGCGCACCAAAGAGAAGGAGGACAAGAACGACAAGT
GGCATCGGGTGGAGCGCAGCAGCGGGAAGTTCGTGCGGCGCTTCCGCCTGCCAGACGACG
CCAAGGTTGATGAAGTGAAGGCCGGACTGGAGAACGGTGTGCTCACCGTCACCGTGCCCA
AAGCCGAGGTCAAGAAGCCCGAGGTGAAGGCCATCGAGATCTCCGGCTGAGTGCATGCGT
CTCGACGTATTATCATTCGGGTTGGAGCCAGTTTGGTTGACGTGTGTGCAAGTTCCGCAA
CCAGTTGTGTCTGCTTCTCGCCGACTCTGGTGAGACATCTCTGTATTGTGTTTCTTTCGC
CAGTCGTTTCTTTGCTCGTGTAACCGCCAGAAGATTAGGCTAAGAATAAATGATAAATAA
ACCATTCTGATTTTCGGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250582.1	793	0.0	334 - 772	100	439 / 439	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_68435.1	970	1e-120	389 - 626	99	237 / 238	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
AK252757.1	771	3e-111	317 - 717	85	345 / 404	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_44536.1	956	1e-109	97 - 538	83	378 / 453	CUST_21202_PI390587928 CUST_21174_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_45029.1	1071	4e-109	248 - 553	90	276 / 306	None	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02010 ABC02014 ABC31513
AK362925	2689	1e-85	333 - 564	91	212 / 232	CUST_21181_PI390587928 CUST_21183_PI390587928 CUST_21178_PI390587928	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02012 ABC02014 ABC04119 ABC21725 ABC31513 ABC31735
MLOC_74996.1	968	1e-85	236 - 467	91	212 / 232	None	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02012 ABC02014 ABC31513
MLOC_25990.1	835	5e-84	21 - 429	81	343 / 425	CUST_21180_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_44537.1	686	6e-73	486 - 682	92	181 / 197	CUST_21181_PI390587928 CUST_21183_PI390587928 CUST_21178_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513