barSeed - Barley Seed Development Database

Probe ABC02014

Source Contig ABC02014

barSeed

Links

Affymetrix Source Sequence (1515 bp)

>ABC02014 1515
AAACTTTCATTTGTATTTAATTACTCACATTAGATTTTACTCATTTTTTTGCTATAATAT
ATATAGGTTGTAGAGAATTTTAAGATGTCCATGACCACCCGACCACCCGCTAGCTGCGTC
ATTGTGTAGTACTCTTTCTGTTTTTAAAATAAGTGTCTGAACTTTATACTAACTTTAATA
TAAAATTGTACTAAACTTGAGACATTTATTTAGACGGAGGGAGTAGTATTTATTTACGTT
TAACTATTGTACTTGCTCGCTGTAAACTTTAATGACAGATAACCTCTACTGTTAATCATG
CTATTCTGGAAACGGCCCCACAACCCATTCTTGAATCTAGACTAGTCGCCCCCTTGCTGG
AATTATACAATTATTTATAGAAAAATCTCACAAAAAAATTATTAACAAAAAAAAAAGGGA
GAAGGCGCCCTAACGGCAGGTTCGTGAGTCCCCTGGAAGACGATAGACCCTTCGAGGGTT
GGGAACAGGAAAGAACGAATGGCTCACAGCCTACCTGGAAAGCGAAAGAGAAACAAACAC
TCGTGGATTGGACAGTCCTCGAGATTCTTCAAGATCAGTACCTACGATGCTATAAGTAGT
GGCTCACCTTCCATCGCCCTCCCAACTCAAGCCAGCCAGCGTCAAACCAAAGCGAACAAC
ATCCTACCTACAATCCGATACAGATTAATTTCAACGCGAGCTACAAACCAAAGCAAGCAA
CACCGACAATGTCGATCGTGAGGAGGAGCAACGTGTTGGACCCCTTCGCCGACCTCTGGG
CCGACCCATTCGACACCTTCCGCTCCATCTTCCCGGCGATCTCAGGCGGGAACAGCGAGA
CAGCTGCGTTCGCGAACGCCCGGATGGACTGGAAGGAGACGCCTGAGGCACATGTCTTCA
AGGCTGATCTTCCTGGCGTGAAGAAAGAGGATGTCAAGGTGGAGGTGGAGGACGGCAACG
TGCTCATCGTCAGCGGCGAGCGCACCAAAGAGAAGGAGGACAAGAACGACAAGTGGCATC
GGGTGGAGCGCAGGAGCGGGAAGTTCGTGCGGCCGTTCCGCCTGCCAGAGGACGGCAAGG
TTGATGAAGTGAAGGCCGGACTGGAGAACGGTGTGCTCACCGTCACCGTGCCCAAAGCCG
AGGTCAAGAAGCCCGAGGTGAAGGCCATCGAGATCTCCGGCTGAGTGCATGCGCTTTTTT
CTACAAAAATATCTGCTTAAGAATAGAGTAAGAAAACTGTGCACGAAGAATATAGGTACG
AAGGGTCTGAAATATTGGTGATCGATGAGCTGAATGTGACCTGTCTTATCTTCAGGTTCA
CTAATCATGGGTCTACGATGATCAATACCCTAAATATTCATTGTATACCCTTTTACCATG
ACGTGATACACAACTTCTGTAATGCTACAGTATTAAAAGAGTATCTTTGGTCCATCATAC
CGTACAAGAGACCAGTGGGCAATCTGGAGAATGAGAGGTCAAGTCAAGGGAACTCTGATG
GGTCTACGATGATCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68435.1	970	0.0	1 - 905	98	886 / 908	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
AK250582.1	793	0.0	13 - 572	99	552 / 560	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
AK362925	2689	0.0	6 - 564	89	505 / 569	CUST_21181_PI390587928 CUST_21183_PI390587928 CUST_21178_PI390587928	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02012 ABC02014 ABC04119 ABC21725 ABC31513 ABC31735
MLOC_74996.1	968	0.0	236 - 794	89	504 / 569	None	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02012 ABC02014 ABC31513
MLOC_45029.1	1071	0.0	316 - 951	85	550 / 646	None	ABC02002 ABC02004 ABC02006 ABC02007 ABC02008 ABC02010 ABC02014 ABC31513
AK252757.1	771	2e-171	3 - 556	86	496 / 575	None	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_44536.1	956	7e-167	299 - 861	85	500 / 585	CUST_21202_PI390587928 CUST_21174_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_68434.1	741	1e-153	409 - 741	96	325 / 337	None	ABC02014
MLOC_25990.1	835	9e-131	210 - 818	81	522 / 646	CUST_21180_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513
MLOC_30920.1	414	9e-101	1 - 396	84	343 / 409	None	ABC02004 ABC02007 ABC02014
MLOC_44537.1	686	2e-67	486 - 682	90	178 / 197	CUST_21181_PI390587928 CUST_21183_PI390587928 CUST_21178_PI390587928	ABC02002 ABC02004 ABC02007 ABC02008 ABC02014 ABC31513