- Probe ABC01397
- Source Contig ABC01397
Affymetrix Source Sequence (1583 bp)
>ABC01397 1583 GCCCTCGCCCCCTCCTCCTCCTCATCCTCCACCACCACCGTCGTCGCACGACCGGACCGC CGGCGCCGCTGCCCCGCCCTCCCCACCCCGGTAGAAAATGGCTGACGCCGAGGACATCCA GCCCCTCGTCTGCGACAATGGTACCGGTATGGTCAAGGCTGGGTTCGCTGGAGATGATGC TCCCAGGGCTGTCTTCCCCAGTATCGTGGGCCGCCCACGCCACACCGGTGTCATGGTCGG GATGGGGCAGAAGGACGCCTACGTCGGTGACGAGGCGCAGTCCAAGAGGGGTATCTTGAC TCTCAAGTACCCCATTGAGCACGGTATCGTCAGCAACTGGGACGATATGGAGAAGATCTG GCATCACACCTTCTACAACGAGCTCCGTGTCGCCCCAGAGGAGCACCCCGTCCTTCTCAC TGAGGCGCCGCTCAACCCCAAGGCCAATCGTGAGAAGATGACCCAGATCATGTTCGAGAC CTTCAACACTCCTGCTATGTATGTCGCCATCCAGGCCGTCCTCTCGCTGTATGCCAGTGG TCGTACCACAGGTATTGTGCTGGACTCGGGAGATGGTGTCAGCCACACTGTCCCCATCTA CGAAGGATACGCTCTTCCCCACGCTATCCTCCGTCTTGACCTGGCTGGGCGTGATCTCAC CGATTACCTCATGAAGATCCTCACTGAGCGTGGTTACTCATTCACCACCACTGCTGAGCG GGAAATTGTGAGGGATGTGAAGGAGAAGCTGTCCTACATTGCACTGGACTACGACCAGGA AATGGAGACTTCCAAGACCAGCTCTTCTGTGGAGAAGAGCTACGAGCTTCCTGATGGGCA GGTTATCACCATTGGTTCCGAGCGTTTCCGTTGCCCTGAGGTCCTCTTCCAGCCATCCTT CATCGGGATGGAAGCTGCAGGTATCCATGAGACCACCTACAACTCCATCATGAAGTGTGA CGTGGATATTAGGAAGGATCTGTACGGCAACATTGTTCTTAGTGGTGGTACCACTATGTT CACTGGAATCGCTGATAGGATGAGCAAGGAGATCACTGCCTTGGCTCCTAGCAGCATGAA GATTAAGGTTGTTGCTCCTCCTGAAAGGAAGTACAGTGTCTGGATCGGAGGATCCATCTT GGCATCTCTCAGCACCTTCCAGCAGATGTGGATTGCAAAGGCTGAGTACGACGAGTCTGG CCCATCCATCGTGCACAGGAAATGCTTCTAATTCTTCGGACCCAAGAATGAAAGCCAGGA GGAGCCTTTATCGCGACCCTCCTGCCGCTTCGCCTCCCTCTTTTGTTGCTGTTTCTTCGT TAGCGTGGACAAAGTTTTCGGCTGGCCTACCGGTTACCGTTTTCTCCTATTCAAAGACTG TAATATCTATTGCTACTTGTGCTTGTCCCTCGTGATTTTGGACACATGAGTTCGGTTTAT TCAATCAAATTTAATCAGATGCCTGGTGAGGCTACTAGAGAAATACGGCTGGTGTTTTTG ATTTCATTTGTCATGTGTCATCACTACCCTGTTAAATGAATGAATAATATGAATTGTCTT GATCCTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_74533.1 | 1770 | 0.0 | 1 - 1403 | 100 | 1403 / 1403 | CUST_38212_PI390587928 CUST_38217_PI390587928 | ABC01389 ABC01390 ABC01393 ABC01394 ABC01397 ABC47406 |
| MLOC_7384.1 | 1603 | 0.0 | 123 - 1260 | 86 | 973 / 1138 | CUST_6150_PI390587928 CUST_31193_PI390587928 CUST_11707_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| MLOC_54382.1 | 1839 | 0.0 | 470 - 1608 | 84 | 961 / 1139 | CUST_38215_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC33336 |
| MLOC_13146.4 | 1639 | 0.0 | 145 - 1280 | 83 | 949 / 1137 | CUST_490_PI415269222 CUST_38188_PI390587928 | ABC01390 ABC01394 ABC01397 |
| MLOC_13146.1 | 1688 | 0.0 | 427 - 1502 | 83 | 895 / 1077 | None | ABC01390 ABC01394 ABC01397 |
| AK369798 | 1224 | 0.0 | 85 - 1162 | 83 | 902 / 1085 | CUST_31193_PI390587928 | ABC01389 ABC01393 ABC01397 ABC45368 |
| AK366404 | 1207 | 0.0 | 72 - 1159 | 83 | 904 / 1095 | None | ABC01389 ABC01393 ABC01397 ABC45368 |
| AK249063.1 | 1659 | 0.0 | 180 - 1314 | 81 | 925 / 1137 | CUST_38187_PI390587928 CUST_489_PI415269222 | ABC01389 ABC01390 ABC01397 |
| MLOC_73132.2 | 1905 | 0.0 | 419 - 1538 | 81 | 911 / 1122 | CUST_38190_PI390587928 | ABC01389 ABC01393 ABC01397 ABC05177 |
| MLOC_59829.1 | 1782 | 0.0 | 401 - 1535 | 81 | 920 / 1137 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| MLOC_59829.2 | 1776 | 0.0 | 459 - 1534 | 81 | 869 / 1078 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01393 ABC01397 |
| AK369759 | 1206 | 0.0 | 71 - 1168 | 80 | 883 / 1102 | None | ABC01389 ABC01394 ABC01397 |
| AK369289 | 1379 | 0.0 | 107 - 1192 | 79 | 872 / 1097 | None | ABC01393 ABC01394 ABC01397 |
| MLOC_54382.2 | 3421 | 2e-162 | 2263 - 2879 | 83 | 515 / 617 | CUST_8575_PI390587928 CUST_38215_PI390587928 CUST_38189_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC32893 ABC33336 |
| MLOC_13146.3 | 796 | 6e-133 | 149 - 628 | 85 | 406 / 480 | None | ABC01390 ABC01394 ABC01397 |