- Probe ABC01390
- Source Contig ABC01390
Affymetrix Source Sequence (1708 bp)
>ABC01390 1708 GAGAGATCCAGAGACCACCAGCGGCAGAGGACTGTCCAGCCACAGCGGCTGCAGTTATAG CCACCACCACCACCACCACCTTCCTCCCTCCCTCCCTCCCTCCGACTCCGATCCCATCTC CGTCCTCCCCTCCCGTTGCCTCCGCCTCCCCCGACCTCCCTCTCCGCGATATTCTGTAGG AAATGGCTGACGGTGAGGACATCCAGCCCCTTGTCTGCGACAATGGAACCGGAATGGTCA AGGCTGGTTTCGCTGGAGATGATGCGCCAAGGGCTGTCTTCCCTAGCATAGTTGGTCGCC CTCGGCACACTGGTGTCATGGTAGGGATGGGGCAGAAGGATGCTTATGTTGGTGATGAGG CGCAGTCCAAGAGAGGTATCCTCACGCTCAAGTACCCCATCGAGCACGGTATCGTAAGCA ACTGGGATGACATGGAGAAAATCTGGCATCACACTTTCTACAATGAGCTCCGTGTGGCAC CCGAGGAGCACCCTGTGTTGCTCACTGAGGCCCCTTTGAACCCAAAAGCCAACAGAGAGA AGATGACCCAGATTATGTTTGAGACTTTCAATGTTCCTGCCATGTACGTCGCTATTCAGG CCGTGCTTTCCCTCTATGCAAGTGGTCGTACTACTGGTATCGTTCTCGACTCTGGTGATG GTGTCAGCCACACCGTGCCCATTTATGAAGGATACGCGCTTCCCCATGCCATTCTTCGTT TGGATCTCGCTGGTCGGGATCTCACGGACTCCCTTATGAAGATCCTCACCGAGAGAGGTT ACTCCTTCACAACCTCAGCTGAGCGGGAAATTGTAAGGGACATCAAGGAGAAGCTTGCGT ACGTTGCCCTTGATTATGAACAGGAGCTGGAGACTGCCAAGAACAGCTCCTCAGTTGAGA AGAGCTACGAGCTTCCTGATGGTCAGGTGATCACGATTGGCGCAGAGAGGTTCAGGTGCC CTGAGGTCCTCTTCCAGCCATCCATGATCGGCATGGAGTCTTCTGGAATCCACGAGACGA CCTACAACTCCATCATGAAGTGTGACGTGGATATCAGGAAGGACTTGTATGGAAACATCG TGCTCAGTGGTGGCACAACTATGTTCCCAGGTATCGCTGACCGTATGAGCAAGGAGATCA CCGCCCTTGCTCCGAGCAGCATGAAGATCAAGGTCGTCGCTCCACCTGAGAGGAAGTACA GTGTCTGGATCGGAGGGTCCATCCTAGCCTCACTCAGCACTTTCCAACAGATGTGGATAT CCAAGGATGAGTACGACGAGTCTGGCCCAGCGATCGTCCACAGGAAGTGCTTCTGATCTC CACGAGCGCTCCACTGCTGTTATCATCTAGTCTTCGGTTATGTTTGGTTCATTCTTCTAG AAATGTATTGCGTATTTGCAAGCTATGTTTTTTTCCAGACGTGACGTGGGTACTCTCGGG ATACGCCACCTATATACGTGGCGGCTCCATGGTGCAAGTGCAAGTACACTATCTATGTTT GTGCATTGTCAGTGTGTTTGTGGGATCAGTTGTCAAACTTGGGTTGGCTTGATTTGTTGT TGGGAATTGTCTGTAATAGCTCATGGTTTTTGCTATGTATTTTTATATCTTACTAAAAAA AAAAAAAAGAATCATGGTAAATTATGGATTTTTTAAAGATCTAAAAAAAAAAAAAAGGGA GAATCATGGTAAATTATGGATTTTTTAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_54382.1 | 1839 | 0.0 | 308 - 1839 | 99 | 1527 / 1543 | CUST_38215_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC33336 |
| MLOC_13146.4 | 1639 | 0.0 | 145 - 1278 | 86 | 980 / 1134 | CUST_490_PI415269222 CUST_38188_PI390587928 | ABC01390 ABC01394 ABC01397 |
| MLOC_78511.1 | 1601 | 0.0 | 289 - 1422 | 86 | 979 / 1134 | CUST_38213_PI390587928 | ABC01389 ABC01390 ABC01391 |
| MLOC_78511.2 | 1361 | 0.0 | 163 - 1296 | 86 | 978 / 1134 | None | ABC01389 ABC01390 ABC01391 |
| MLOC_13146.1 | 1688 | 0.0 | 427 - 1500 | 86 | 922 / 1074 | None | ABC01390 ABC01394 ABC01397 |
| AK249063.1 | 1659 | 0.0 | 180 - 1312 | 85 | 960 / 1133 | CUST_38187_PI390587928 CUST_489_PI415269222 | ABC01389 ABC01390 ABC01397 |
| MLOC_54382.2 | 3421 | 0.0 | 2967 - 3386 | 97 | 406 / 420 | CUST_8575_PI390587928 CUST_38215_PI390587928 CUST_38189_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC32893 ABC33336 |
| MLOC_74533.1 | 1770 | 0.0 | 264 - 1402 | 84 | 961 / 1139 | CUST_38212_PI390587928 CUST_38217_PI390587928 | ABC01389 ABC01390 ABC01393 ABC01394 ABC01397 ABC47406 |
| MLOC_59829.1 | 1782 | 0.0 | 401 - 1533 | 84 | 955 / 1133 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| AK252867.1 | 2197 | 0.0 | 255 - 1266 | 86 | 871 / 1012 | CUST_41481_PI390587928 | ABC01389 ABC01390 ABC01391 ABC02425 ABC43459 |
| MLOC_59829.2 | 1776 | 0.0 | 459 - 1532 | 84 | 901 / 1074 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01393 ABC01397 |
| MLOC_7384.1 | 1603 | 0.0 | 124 - 1259 | 82 | 934 / 1137 | CUST_6150_PI390587928 CUST_31193_PI390587928 CUST_11707_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| MLOC_13146.3 | 796 | 6e-153 | 149 - 628 | 87 | 418 / 480 | None | ABC01390 ABC01394 ABC01397 |
| AK358850 | 1450 | 5e-119 | 140 - 1236 | 74 | 817 / 1105 | None | ABC01390 |
| MLOC_13146.2 | 442 | 8e-87 | 161 - 419 | 89 | 231 / 259 | None | ABC01390 ABC01394 |