- Probe ABC01394
- Source Contig ABC01394
Affymetrix Source Sequence (1640 bp)
>ABC01394 1640 CGGCCTAGTTCGCCGCCACCGCCGCCACCCACCCCCTCATCCTCTTCGTCCGCTCTTTGC AGTGTCCGCTCATCTCGGCGGGAGGTCCTCAGGCGGGCAGGTTCCCCTAGATCCCCGGAG TCACTTAATCAAATGGCTGACGGTGAGGACATCCAGCCCCTTGTCTGCGACAATGGAACT GGCATGGTCAAGGCTGGTTTTGCAGGGGATGATGCGCCAAGGGCTGTCTTCCCAAGTATC GTTGGGCGCCCCCGCCACACTGGTGTGATGGTGGGGATGGGGCAGAAAGATGCATATGTT GGTGACGAGGCCCAATCCAAGAGGGGTATCCTCACCTTGAAGTACCCGATCGAGCATGGT ATCGTCAGCAACTGGGACGATATGGAGAAGATCTGGCATCACACTTTCTACAATGAGCTC CGTGTTGCACCTGAGGAGCACCCAGTATTGCTGACTGAGGCACCCCTGAACCCCAAGGCT AACAGGGAGAAGATGACACAAATCATGTTTGAGACCTTTAATGTTCCAGCCATGTATGTG GCCATCCAGGCAGTGCTTTCCCTATATGCTAGTGGACGCACAACAGGTATCGTGTTGGAT TCTGGTGATGGTGTCAGCCATACTGTGCCAATCTATGAAGGATATGCCCTTCCACATGCC ATCCTTCGTCTTGACCTCGCTGGGCGTGACCTAACTGACTGTTTGATGAAGATTCTTACG GAGAGAGGTTACTCCTTCACCACGACTGCCGAACGGGAAATTGTAAGGGATATTAAGGAG AAGCTCGCATATGTGGCTCTTGACTATGAACAAGAGCTGGAAAATGCCAAGAGCAGCTCC TCTGTGGAGAAGAGCTATGAGCTGCCTGATGGGCAGGTGATCACCATTGGGGCAGAGAGG TTCCGTTGCCCTGAGGTCCTTTTCCAGCCATCTTTCATTGGTATGGAAGCTGCTGGAATC CATGAGACCACCTACAACTCTATCATGAAGTGTGATGTGGATATCAGGAAGGACCTGTAT GGTAACATTGTGCTCAGTGGTGGGTCAACTATGTTCCCGGGTATTGCTGACCGTATGAGC AAGGAGATCACTGCCCTTGCACCAAGCAGCATGAAGATCAAGGTGGTGGCACCGCCTGAG AGGAAGTACAGTGTCTGGATTGGAGGGTCGATTCTTGCCTCACTTAGTACCTTCCAACAG ATGTGGATCTCGAAGGGTGAGTACGATGAGTCAGGTCCAGCGATTGTCCACCGGAAGTGC TTCTAAGTTGCGAGTTGTCTGGGTCTTCTGAATCTATTCTGGCTGTTCTTTTCTCAAGTC CTTGCCATGTAAGCTACTATGTTTGAGATTGCTGGGATTCTGTTGACTGTATTGCCGGAT TAATTTGTTGGATCAAGATTGCGTACCTTGTAGACTCGTAATATGTTCAGTGGGCTGCTA TATTTGATCGGTGCTGAATCATATGTCGCATGTTCCTGGGTTTTTTTCATGCCAAAAGGT TTGGTGCTAGCGTGGGGGGAGTGTCAAAATATCTACCAGTCTTTGTAAGAGTTTTTTGTG TGAGCCCCATAATCATTTCCTTGTGTACATTCACTTCTGCGATATGTGATCTTTTGGGTT GCGAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_13146.4 | 1639 | 0.0 | 17 - 1639 | 99 | 1620 / 1623 | CUST_490_PI415269222 CUST_38188_PI390587928 | ABC01390 ABC01394 ABC01397 |
| MLOC_13146.1 | 1688 | 1e-94 | 163 - 363 | 98 | 197 / 201 | None | ABC01390 ABC01394 ABC01397 |
| MLOC_54382.1 | 1839 | 0.0 | 475 - 1608 | 87 | 981 / 1134 | CUST_38215_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC33336 |
| MLOC_13146.3 | 796 | 5e-84 | 624 - 796 | 99 | 172 / 173 | None | ABC01390 ABC01394 ABC01397 |
| MLOC_74533.1 | 1770 | 0.0 | 262 - 1397 | 83 | 948 / 1137 | CUST_38212_PI390587928 CUST_38217_PI390587928 | ABC01389 ABC01390 ABC01393 ABC01394 ABC01397 ABC47406 |
| MLOC_13146.2 | 442 | 0.0 | 33 - 422 | 99 | 388 / 390 | None | ABC01390 ABC01394 |
| AK369759 | 1206 | 0.0 | 71 - 1168 | 78 | 857 / 1102 | None | ABC01389 ABC01394 ABC01397 |
| AK369289 | 1379 | 3e-175 | 95 - 1193 | 77 | 852 / 1107 | None | ABC01393 ABC01394 ABC01397 |
| MLOC_54382.2 | 3421 | 2e-118 | 1573 - 1972 | 86 | 344 / 400 | CUST_8575_PI390587928 CUST_38215_PI390587928 CUST_38189_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01394 ABC01397 ABC32893 ABC33336 |