- Probe ABC01393
- Source Contig ABC01393
Affymetrix Source Sequence (1701 bp)
>ABC01393 1701 CCGCCTCGCTCTCACGCCGCTCGCGTCACTCCGCGCTCCCACGAACCACCCCCAAATTCC GTCAACGCGCCAACCCCGAGAAAAGCGCTTGAGAAATGGCCGAAGAGGATGTCCAGCCGA TTGTGTGTGACAATGGCACCGGAATGGTCAAGGCTGGATTCGCCGGCGACGACGCGCCGA GGGCCGTGTTCCCCAGCATCGTGGGGAGGCCGCGGCACACGGGGGTGATGGTGGGCATGG GGCAGAAGGACGCGTACGTGGGCGACGAGGCGCAGTCGAAGCGAGGCATCCTGACGCTCA AGTACCCGATCGAGCACGGCGTGGTGGGCAACTGGGACGACATGGAGAAGATCTGGCACC ACACCTTCTACAACGAGCTCCGGGTGGCGCCGGAGGAGCACCCCGTGCTGCTCACGGAGG CGCCCATGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGATCATGTTCGAGACCTTCA ACTGCCCCGCCATGTACGTGGCCATCCAGGCCGTGCTGTCCCTCTACGCCAGCGGCCGGA CCACCGGCATCGTCATGGACTCGGGCGACGGCGTCAGCCACACCGTCCCCATCTACGAGG GCTTCACGCTCCCCCACGCCATCATCCGGCTGGACCTCGCCGGGCGCGACCTCACCGACG GCCTCATGAAGATCATGACGGAGAGGGGCTACTCCTTCACCACCACCGCCGAGCGGGAAA TCGTCAGAGACATCAAGGAGAAGCTCGCCTACGTCGCCCTCGACTACGAGCAGGAGCTGG AGACCGCCAGGACCAGCTCCGCCGTCGAGAAGAACTACGAGCTGCCGGACGGCCAGGTGA TCACCATCGGGGCGGAGCGGTTCAGGTGCCCCGAGGTGCTCTTCCAGCCGTCCATGATCG GCATGGAGGCCGCAGGCATCCACGAGGCCACGTACAACTCCATCATGAAGTGCGATGTCG ATATCAGGAAGGATCTGTACGGGAATGTCGTGCTCAGCGGGGGTTCCACCATGTTCCCTG GGATCGCCGACCGTATGAACAAGGAGATCACCGCGCTCGCGCCCAGCAGCATGAGGGTGA AGGTGGTCGCTCCGCCGGAGAGGAAGTACAGTGTGTGGATCGGCGGCTCCATTCTCGCCT CCCTCAGTACCTTCCAGCAGATGTGGATCTCCAAGGCAGAGTACGACGAAGCTGGCCCGT CGATCGTCCACATGAAGTGCTTCTGATCAGTCCATGGCTTGCCAACCTGTACCTGTCATT CAGTTGCTTGAGGTCCAAATCGCAGATGCTTGAACGTGTCATGGTTTCCACTGCGTCGTG GTTGGCTGAAAGTGTTTTGGTCATGGAACAAATTTGAAAGGTAAGGTCTGATTGATGGTT TCGAACGATTCTGTAGGGCGTCGGGTCAGTTTCAGTGGGTTCACTGAAGGTGGGTTGTTC AGCATGCAGTCTGGGGCATTTCTGTCGGGTTCGGTGATTCAGCTCGTGCGTGTGCTGGAA ACCTGAAACAGAGTGTGTGTTTGTTTGCACCACCCCGGCGTGGGTGTTGATTCTTGTACC TTTTGTAGCGGGGGTTCTTGTCAAACTACCTGAAAGCTTATTTTGTTGGTACTTAAGCAT TTGTACATTTAAATTATTGAGGGGATTTTATGTTTGTTATGTCTTGTCTTTTGTATATGA NGTACGTACACTTTTATATAC
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_73132.2 | 1905 | 0.0 | 1 - 1642 | 100 | 1642 / 1642 | CUST_38190_PI390587928 | ABC01389 ABC01393 ABC01397 ABC05177 |
| MLOC_73132.1 | 1231 | 7e-53 | 30 - 143 | 100 | 114 / 114 | CUST_38190_PI390587928 | ABC01389 ABC01393 ABC05177 |
| MLOC_7384.1 | 1603 | 0.0 | 140 - 1259 | 87 | 972 / 1120 | CUST_11707_PI390587928 CUST_31193_PI390587928 CUST_6150_PI390587928 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| AK366404 | 1207 | 0.0 | 68 - 1157 | 82 | 898 / 1090 | None | ABC01389 ABC01393 ABC01397 ABC45368 |
| AK369798 | 1224 | 0.0 | 85 - 1160 | 83 | 890 / 1078 | CUST_31193_PI390587928 | ABC01389 ABC01393 ABC01397 ABC45368 |
| MLOC_74533.1 | 1770 | 0.0 | 264 - 1383 | 81 | 911 / 1122 | CUST_38212_PI390587928 CUST_38217_PI390587928 | ABC01389 ABC01390 ABC01393 ABC01394 ABC01397 ABC47406 |
| MLOC_59829.1 | 1782 | 0.0 | 414 - 1533 | 81 | 905 / 1121 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01391 ABC01393 ABC01397 |
| MLOC_59829.2 | 1776 | 0.0 | 459 - 1532 | 80 | 865 / 1075 | CUST_489_PI415269222 | ABC01389 ABC01390 ABC01393 ABC01397 |
| AK248710.1 | 1530 | 0.0 | 141 - 1277 | 80 | 907 / 1139 | CUST_38587_PI390587928 CUST_3627_PI390587928 CUST_26523_PI390587928 | ABC01393 ABC05177 ABC37901 |
| MLOC_56003.1 | 1701 | 0.0 | 397 - 1533 | 80 | 906 / 1139 | CUST_3627_PI390587928 CUST_38587_PI390587928 | ABC01393 ABC05177 ABC37901 |
| MLOC_56003.2 | 1550 | 0.0 | 166 - 1302 | 80 | 906 / 1139 | CUST_38587_PI390587928 CUST_3627_PI390587928 CUST_26523_PI390587928 | ABC01393 ABC05177 ABC37901 |
| MLOC_56003.3 | 1637 | 0.0 | 309 - 1382 | 79 | 852 / 1076 | CUST_26523_PI390587928 CUST_3627_PI390587928 CUST_38587_PI390587928 | ABC01393 ABC05177 ABC37901 |
| AK369289 | 1379 | 0.0 | 91 - 1190 | 78 | 863 / 1108 | None | ABC01393 ABC01394 ABC01397 |